Mycoplasmopsis agalactiae 5632: MAGa3380
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Entry
MAGa3380 CDS
T01192
Symbol
pcrA
Name
(GenBank) ATP dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mal
Mycoplasmopsis agalactiae 5632
Pathway
mal03420
Nucleotide excision repair
mal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAGa3380 (pcrA)
03430 Mismatch repair
MAGa3380 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mal03400
]
MAGa3380 (pcrA)
Enzymes [BR:
mal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAGa3380 (pcrA)
DNA repair and recombination proteins [BR:
mal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAGa3380 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MAGa3380 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
Glyco_hydro_106
PcrA_UvrD_tudor
ADDB_N
S4_2
Motif
Other DBs
NCBI-ProteinID:
CBH40552
UniProt:
D3VQF8
LinkDB
All DBs
Position
complement(393080..395284)
Genome browser
AA seq
734 aa
AA seq
DB search
MIENKIIEIQKAKIFESLNEEQTEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGI
SPDHILAVTFTNKAASEMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKND
FQIIDDNDKKKILKDIYKEHDLVPTDSNFKNLTRFFSWLKNKLYASDEEIIDFINSDPES
EFYGDGETVVKIYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKKWALKYSYILVDE
FQDTSAIQYEIIKYLSSQKAQLTIVGDPDQTIYRWRGADVNLILSFEKDFENTKTIILNK
NYRSTKKILAAANNLIKFNRNRFNKNLVTDNPDGDEIEYIHAFSPEAEVRWVVQKINDLK
KQKIQLKNIAIFYRSNSYSRNFEEQLMNEKINYRIFGGEKFYQRKEIKDALAFLRVIYDG
NDLQLKRIINVPPRKIGEASLNKIVSFANEKNLSLYKTLVTHYKELPVPKEVIINIIALL
NCVNKYKAALRQGNKIHVVLESFLKEIGFLKYVNEDVGLKGTGEENIRALLEGIKSWEIT
NPNKGLKEYFEYISLISASDSSDESMSYVSLMTVHAAKGLEFDNVFLVGMCENIFPNYRA
YKVAEAMEEERRLAYVAITRAKEKLFVSDSRGLLLYSQTEKKPSRFLKEMGIDINKHILQ
KDNSIFVDGELEDEEQIRKRNKKIIAGDVISHTFFGEGEVLEVNGDTITVHFATTGIKSL
AKNHQSVRLLRDND
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaataagattattgagattcaaaaagctaaaatttttgaaagtttgaacgaa
gagcaaactgaagctttatattattttgatggcccattgcgtataatagctggtgctggc
agtggaaaaactagggttttaactagaaaaattgcctacctaattaatgttttaggtata
tcgcctgatcacattttggctgtaacctttaccaacaaagcagcttcagaaatgtcagaa
agagttaaacagtacacaaacactaagtttaacaaaggcacagcagaaatttcaacattt
cactcattgtgtgcaagaattctaagagaagaagcattccatattaacttgaaaaatgac
tttcaaattattgatgataatgacaaaaagaagattttaaaagatatttataaagagcat
gatttagtaccaactgattcaaatttcaaaaatttaactcgctttttttcatgacttaaa
aacaaactttatgcaagtgatgaagaaataattgactttattaattctgaccctgaaagt
gagttttacggcgatggcgaaactgttgttaaaatttacaatttttacaatgagcagctt
aaacatttacaaagcttagattttgatgatttattaattaaggttaatgaacttttttac
aaaaatcctgaaattgtaaaaaaatgagctttaaaatactcatatattttagttgatgag
tttcaagacacttcagcaattcaatacgaaatcattaaatatttatcatcgcaaaaagct
cagcttacaatagttggcgatccagatcaaacaatttatcgttgacgtggtgctgatgtt
aacttaattttgtcttttgaaaaagactttgaaaacactaaaaccatcattttaaataaa
aactatcgttcaactaaaaaaatattagctgctgctaacaacttaattaaatttaatcgc
aacagatttaataaaaatttagtaactgataatcctgatggtgatgaaattgaatatatt
catgcctttagccctgaggctgaagtaagatgagttgttcaaaaaattaatgacttaaaa
aagcaaaaaattcaacttaaaaatattgctatattttaccgttctaatagctactctaga
aattttgaagagcagttaatgaatgaaaaaattaactacagaattttcggtggtgaaaag
ttttatcaacgtaaagaaattaaggatgctttagcatttttaagagttatttatgatgga
aatgacttacagcttaaaagaattatcaatgtgcccccaagaaaaattggcgaagcttca
ttaaacaaaattgttagctttgctaatgaaaaaaatctttcactttataaaactttagtt
actcattataaagaattgccagtgcctaaagaagttatcatcaacattattgctctatta
aattgtgttaataaatacaaggcagctttacgccagggcaacaaaattcatgtggtttta
gagagctttttaaaagaaataggttttcttaaatatgtcaatgaagatgtaggcttaaag
ggtaccggagaagaaaacattagagcgcttttagaaggtattaagtcttgagaaataact
aatcctaataaagggcttaaagagtattttgaatacatttctcttatttctgcttctgat
tcttcggatgaatcaatgagctatgtttcattaatgactgtacatgctgcaaagggactt
gaatttgataatgtctttttagtaggcatgtgcgaaaatatttttccaaattacagagca
tataaagttgctgaagccatggaagaagaaagaagactagcttatgtcgctataactaga
gctaaagaaaaattatttgtcagcgactctcgtggtttacttctttattcacaaactgag
aaaaagccatcacgctttttaaaggaaatgggtatagacattaataagcatatattacaa
aaagataactcaatctttgttgatggcgaattagaagatgaagaacaaattagaaaaaga
aacaaaaaaataatagctggtgatgttatcagtcacactttctttggtgaaggtgaagtt
ttagaagttaatggtgatacaattactgttcactttgcaactacaggcattaagtcttta
gctaaaaaccaccaatcagtaagattactaagagataatgattaa
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