Marinobacter nauticus VT8: Maqu_1592
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Entry
Maqu_1592 CDS
T00454
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
maq
Marinobacter nauticus VT8
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Maqu_1592
Enzymes [BR:
maq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Maqu_1592
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
nSTAND3
AAA_22
ResIII
AAA_23
NACHT
ABC_tran
AAA_30
NTPase_1
T2SSE
SLFN-g3_helicase
PhoH
SRP54
Motif
Other DBs
NCBI-ProteinID:
ABM18676
UniProt:
A1U107
LinkDB
All DBs
Position
complement(1783321..1787259)
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AA seq
1312 aa
AA seq
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MSLQLLMTDNTRSETPVDSRAAVKAMMNQLDACNQQEVARIIRRVSRCKGNPGNKDLEKM
AQWLDQGLDKVRKRQALHKPATFPAGLPVSDRVEDISDAINNHQVVIIAGETGSGKTTQI
PKICLNLGRGIRGIIGHTQPRRIAARSVSSRIAEELGETVGQQIGYQVRFTDNTSESSRV
KVMTDGILLAEVQHDRFLDRYDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSA
TIEVERFSEFFNEAPVIEVSGRTFPVDIRYRPLVGDEDDRDQGWTDGVLSALDEIEQHER
QEKQPPGDVLVFLPGEREIRALSKVLRHADLRHTEVLPLYSRLSNQEQNRVFQGHKGRRI
VLSTNVAETSLTVPGIRYVIDTGVARISRYSVRSKIQRLPIEPISQASANQRAGRCGRVA
PGICFRLYDETDFLNRPEYTDPEILRTNLASVILQMATSGLGEIRHFPFLEAPDRRQVND
GYKLLEELSAVDDKRRVTRLGRTMARLPLDPRLARMLVTSAEQGSLAEVLIVIAGLSVQD
PRERPQDKQQAADQAHAPFNDKESDFATLLNIWNWFEEQRQELSQNQLKKLCQKTFLSWM
RMREWRDIHRQLTLICREQKLTLNSQPANYDAVHKAILGGLLGQVAVKVEKREYLATRNR
KVMIFPGSKVGKTAPKWIVAAEIVETSKVFARMVAAIQPEWVEPLAGHVVKHHYFEPHWE
QKRAQVMGYEKVTLYGLDVVPKRRIPYAKVDPAECRNLFIRRALVEGDFQSRAPFIARNR
EMLDTVENLEKKTRRRDLLVDDEVLVAFYDQRLPSDIVSGRHFESWWKGLSAEELKKLEL
TETDVLQRPLDETSAQQYPDYLEWEGVKYPLSYEFEPTSERDGVTLNVPLMALRQIPARR
LEWLVPGLLREKCIALVKGLPKALRRNFVPVPDFVDAALANLQPGNEPLAIKLGEQLRRM
TGVQIDPDAWPEEELPRHLRMNLRVTGDKGKVIAESRDTDELQARLEGRAEEALASATRD
EPGKKQAGEYTDWQFGTFPEQVQTEKGGMQVTVYPALEDLGNKVRASRCLDKLTAEDTHR
RGVARLIVNRFGNTLADLERKLPRFKQSALMFAPIGQAKGLLDDLVLSTVMQHFLADQLP
RTEQAFAELFDRHRGDFIPALEAADERLFQAMNGYQKVAKQLKGKINLALAASMADLKFQ
LQHLVSPGFLVNTPVQWLERFGTYFEAADIRLEKMAREMGREREFLHTIEPLWARYAAKL
EQQKRQGVRDPELETYRWMMEEFRVSFFAQQLGTVMTVSAKRLDKQWEKTRI
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagctgttaatgactgacaacactcgttccgaaactcccgttgattcccgg
gccgctgtcaaagcgatgatgaaccagctggacgcctgtaaccagcaggaggtcgcccgc
atcattcgtcgtgtaagccgttgcaagggtaaccctggtaacaaggacctggaaaagatg
gcgcaatggctggatcaggggctcgataaggtgcgtaagcgtcaggcattgcacaagccg
gcgacctttcccgcagggttgccggtcagcgatcgcgtcgaggacatcagtgatgccatc
aacaaccatcaggtggtgatcattgctggtgagaccgggtccggtaaaaccactcagatt
ccgaagatttgcctgaacctggggcggggcatccgcgggattattggccatacccagccc
cggcgtatcgccgcgcgcagtgtttccagccggattgccgaagaactgggtgagacggta
ggccagcagatcgggtaccaggtgcggtttaccgacaacacctcggaatcgtcccgggtc
aaggtaatgaccgacggcatcctgctggcagaagtgcagcatgaccgttttctggatcgc
tatgacacgctgattatcgatgaggcccacgagcgcagccttaatattgattttctgctc
ggctatctcaagcaactgttgccgaagcgtccggatctgaaagtcatcattacatcggcc
accatcgaggtggagcgtttcagcgagtttttcaacgaagccccggtgatcgaagtcagc
ggtcgtacctttccggtagatattcgatatcgacccctggttggggacgaggacgacagg
gatcagggctggaccgacggtgtcctctcggcgttggacgagattgaacagcatgaacgg
caggaaaagcagcctccgggcgatgtactggtttttctgccaggcgagcgcgagatccgg
gccctgagcaaggtgctgcgccacgccgacctgcgtcataccgaagtgttgccgttgtat
tcccgcctgagcaaccaggaacagaaccgggtgtttcagggccacaagggacggcggatt
gtgttgtccaccaacgtggctgagacctcgctgaccgtgcccggtattcgctacgtgatt
gatactggcgttgcgcgcatcagccggtacagtgtgcgctcgaaaatacagcgactgcca
attgaaccgatttcccaggccagtgccaaccagcgggcaggccggtgtggccgtgtggcg
ccgggtatctgtttccgtctgtacgacgaaacggactttttgaaccgcccggaatacacc
gatcccgaaatcctgagaaccaaccttgcctccgttatcctgcaaatggcgacatccgga
ctgggtgagatccggcattttccgtttcttgaggcgccggatcgtcgtcaggtcaacgat
ggttacaagctgctggaagagcttagcgccgtcgatgacaaacggcgtgtcaccaggctt
gggcgcaccatggcccgattgccgctggatccccggttagcccggatgctggtgacctca
gcagagcagggcagtctggcggaagtgttgattgtgattgccggcctgagcgttcaggac
cccagggaacgcccacaggacaagcagcaggcggccgaccaggctcacgcaccgttcaac
gacaaggaatcggatttcgccaccctgctgaatatctggaactggttcgaagagcagcgc
caggaattgtcccagaaccagctcaaaaaactgtgccagaaaaccttcctgagctggatg
cgaatgcgtgagtggcgggacatacaccgccagctcactctgatctgccgggagcagaag
ctgacattgaatagccagccggccaactacgacgcagtgcataaagccattctgggcggc
ttgcttggccaggtggcggtgaaagtggaaaagcgggagtatctggccacccgaaaccgc
aaggtaatgattttcccgggttccaaagtcggcaagacggcacccaagtggattgtggcg
gccgagatcgtcgaaaccagcaaggtgtttgcccgaatggtggcggccattcagcccgaa
tgggtggagccgctggcaggccacgtggtaaagcaccactattttgagccccactgggag
cagaagcgtgcccaggtgatggggtacgagaaggtcacactttacggcctggatgtggtc
cccaagcgccgtattccctacgccaaggtagaccctgccgagtgccggaatctgtttatt
cgccgtgccctggttgagggggatttccagtccagggcgccgtttattgcccgtaaccgc
gaaatgctggataccgtcgagaatctggagaagaaaacccggcggcgggatcttctggtg
gatgatgaagttttggtggcgttctacgaccagagactgccatcggatatcgtcagtggc
cgacattttgaatcctggtggaaaggactatctgctgaggaattgaagaagctggagctg
acagagaccgacgttctgcaaaggcctctggatgagacctcggcccagcagtaccccgac
tacctggaatgggaaggggtgaaataccctctgagttatgagtttgaacccaccagtgag
cgcgacggtgtcaccctcaacgtgcccttgatggctttgcgacagatccccgcccggcgt
ctggagtggctggtgccagggttgcttcgggaaaaatgcattgccctggtcaagggattg
ccgaaagcgttgcgccggaattttgtgccggtaccggactttgtcgacgcggctctggcc
aacctgcagccgggcaacgagcctctggcgatcaaactgggtgaacagctgcgacgaatg
accggggtccagattgatccggatgcctggccggaggaggaactgccccgccacctgagg
atgaacctgagggtgaccggcgataaaggcaaggtcatcgccgaaagccgagacaccgat
gagctccaggccagactggagggccgggccgaagaagcgctggcctcggcgacgagagat
gaacccgggaaaaaacaggcgggtgaatacaccgactggcaattcggcaccttcccggag
caggttcaaacagaaaaaggcggtatgcaggtcacggtttacccggctctggaagatctg
ggtaataaggtgcgggcttctcgttgtctggacaagctcaccgcagaggatacccatcgt
cgcggcgttgcgcggctgattgtgaaccggttcggcaataccctggcggatcttgaacga
aagctgccccggttcaagcagtctgcgttgatgtttgcaccgatcggccaggcaaaggga
ctgctggatgatctggtgttgtcgacggttatgcagcattttctggcggatcaactgccc
agaaccgaacaggcgttcgcagagctgttcgaccgccaccggggggacttcattcctgct
ctggaagctgctgacgagcgcctgtttcaggccatgaacggctaccagaaagtcgcgaaa
cagctcaagggcaagatcaatctggcgctggcggcaagcatggctgacctcaaattccag
ttgcaacatctggtgtccccgggattcctggtcaataccccggttcagtggctggaacgg
ttcggaacctattttgaagcggcggacatccggttggaaaaaatggcgcgggaaatgggc
cgtgagcgggaatttcttcacaccatcgaaccattatgggcccggtacgccgccaaactg
gagcagcagaagcgtcagggtgtacgcgacccggagctggaaacctaccgctggatgatg
gaggagttccgggtgtcgttttttgcccaacaactgggcacggtcatgaccgtttcggcg
aagcggttggataaacaatgggaaaagacccgtatataa
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