KEGG   Marinobacter sp. CP1: ACP86_08480
Entry
ACP86_08480       CDS       T04052                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
mari  Marinobacter sp. CP1
Pathway
mari03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mari00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACP86_08480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mari03019]
    ACP86_08480
Enzymes [BR:mari01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     ACP86_08480
Messenger RNA biogenesis [BR:mari03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ACP86_08480
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA UTP25 CMS1 HEM4 AAA_22
Other DBs
NCBI-ProteinID: AKV96192
UniProt: A0A0K1U8U6
LinkDB
Position
complement(1811935..1813257)
AA seq 440 aa
MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL
QRLGENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMKLR
KGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAKRQN
LLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLVRDN
SWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVATD
IAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGIERL
IKKQLPRTEVEGFEPTNNLPLKPKAKADPSRARTRSSNGGGNGRPGGKPKSFGDKPGGRS
GGRSQNGGGQRSRSAQRQSA
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgagtttttcttcactcggtttgtccgagcagctggtccgtgccacgtctgaccagggt
tatgaaaccccgtctcccattcaggcccaggccattcccgccgtgctttctggccgggac
gttatggctgctgcccagaccggtaccggcaaaaccgccggttttaccttgcccttgctg
cagcgtctgggtgaaaacccgcgcaccggcaaaggcccccgcgcgctgatcctgacgccc
acccgtgaactggcggcacaggttcacgacagcgtgaatctttacagcaaatacgttcct
accaaggccgcggtggttttcggtggtgtgaaaatcaatccgcagatgatgaagctgcgc
aaaggcctggacgtgctggtggcaacaccgggccgcctgatggacctgtatcagcagaac
gctgtgcgcttcaacgaagtggaaatcctggtgctggacgaagccgaccgcatgctggat
atgggctttatccgcgacattcgcaagatcctttcgctgttgccggccaagcgccagaac
ctgttgttctccgccaccttctcgaatgagattcgtactctggccgaaggtctgctggat
aacccggttcaggttgaagtggcggctcgaaacacctctgccgaaaacatcaagcagtct
gtctacccggtggatcagagccagaaaaccgccctgctgagcaagctggtgcgtgacaac
agctgggaccaggtgctggtgtttacccgcaccaagcacggtgccaaccgcctgacccag
aaactggagaaggacggtattaccgctgctgccattcacggcaacaagtcgcagggtgcc
cgtacccgcgcgctggcggacttcaaggctggcgaagtgcgtgtgctggtggcaacggat
atcgcggctcgtggcctggacatcaagcagctgccccaggtggtgaactttgaactgccc
aacgtaccggaagactatgtgcatcgtattggccgcaccggccgtgccggtgagagtggt
cacgccctgtcactggtcagtgctgatgaaggaaaaatgctggcgggcatcgaaaggctg
atcaagaagcagctgccgcgcacggaagtggaaggctttgagccgaccaacaacctgccg
ctgaagccgaaagccaaggccgatcccagccgcgcccgtacccgcagtagtaacggtggt
ggtaatggccggcccggaggcaagccgaaaagctttggggacaagccaggtggccgcagt
ggtggccggagccagaatggcggtggtcagcgaagccgctcagcccagcgccagagtgcc
tga

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