Mycobacterium avium subsp. paratuberculosis E1: RC58_08285
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Entry
RC58_08285 CDS
T03787
Name
(GenBank) HrcA family transcriptional regulator
KO
K03705
heat-inducible transcriptional repressor
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mavi03000
]
RC58_08285
Transcription factors [BR:
mavi03000
]
Prokaryotic type
Other transcription factors
Others
RC58_08285
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Gene cluster
GFIT
Motif
Pfam:
HrcA
HTH_DeoR
HTH_11
HTH_20
HrcA_DNA-bdg
DUF5998
Motif
Other DBs
NCBI-ProteinID:
AJK75019
UniProt:
A0A7L5MI42
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Position
1796137..1797168
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AA seq
343 aa
AA seq
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MGSADERRFEVLRAIVADFVATKEPIGSKTLVERHNLGVSSATVRNDMAVLEAEGYITQP
HTSSGRVPTEKGYREFVDRLDDVKPLSAAERRAIQNFLESGVDLDDVLRRAVRLLAQLTR
QVAIVQYPTLSSSTVRHLEVIALTPARLLMVVITDSGRVDQRIVELGDVIDDHELSRLRE
MLGQALVGKKLSAASVAVADLAEQLRSPDGLGDAVGRSATVLLESLVEHSEERLLMGGTA
NLTRNAADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQMVGTSMVTT
AYGTSDTVYGGMGVLGPTRMDYPGTIASVAAVAMYIGEVLGAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtggggagtgccgatgagcgtcgcttcgaggtgctgcgcgccatcgtcgccgacttcgtc
gccaccaaggagccgatcggttccaagaccttggtggagcgtcataacctgggcgtgtcg
tcggctaccgtccgcaacgacatggcggtgctggaggccgagggctacatcacccagccg
cacaccagctccgggcgggtccccaccgagaagggctaccgcgaattcgtcgaccggctc
gacgacgtcaagccgctgtcggcggccgaacggcgcgcgatccagaacttcctggaatcg
ggtgtcgacctcgacgacgtgctgcgccgcgcggtgcggctgctggcgcagctgacccgg
caggtggccatcgtgcagtacccgacgttgtcgtcgtccaccgtgcggcacctcgaggtg
atcgccctgaccccggcgcggctgctgatggtcgtcatcaccgactccggccgggtggat
cagcgcatcgtcgaactcggcgacgtcatcgacgaccacgagctgtcccggctgcgcgag
atgctcgggcaggcattggtcggcaagaagctgtccgccgcgtcggtcgcggtggccgac
ctcgccgagcagctgcgcagccccgacggcctgggtgacgcggtgggccggtcggcgacg
gtgttgctggagtcgctggtcgaacacagcgaggaacgcctgctgatgggcggtaccgcc
aacctgacccgcaacgccgccgatttcggcggctcgttgcgttccatcctggaggcgctc
gaggagcaggtcgtggtgctgcggttgctggccgcccagcaggaggccggtaaggtgacg
gtgcgcatcggccacgagacggccgccgagcagatggtgggcacctcgatggtcaccacc
gcctacggcacctccgacaccgtttacgggggaatgggtgtgctggggcccacccggatg
gactatccgggaactatcgccagcgttgctgcggttgccatgtatatcggcgaagtcctg
ggtgctcgatga
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