Candidatus Methylopumilus planktonicus: BN1208_0263
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Entry
BN1208_0263 CDS
T03869
Symbol
groEL
Name
(GenBank) chaperone Hsp60, peptide-dependent ATPase, heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN1208_0263 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbat03019
]
BN1208_0263 (groEL)
03110 Chaperones and folding catalysts [BR:
mbat03110
]
BN1208_0263 (groEL)
03029 Mitochondrial biogenesis [BR:
mbat03029
]
BN1208_0263 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbat04147
]
BN1208_0263 (groEL)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN1208_0263 (groEL)
Messenger RNA biogenesis [BR:
mbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN1208_0263 (groEL)
Chaperones and folding catalysts [BR:
mbat03110
]
Heat shock proteins
HSP60 / Chaperonin
BN1208_0263 (groEL)
Mitochondrial biogenesis [BR:
mbat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN1208_0263 (groEL)
Exosome [BR:
mbat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN1208_0263 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BN1208_0263 (groEL)
Exosomal proteins of breast cancer cells
BN1208_0263 (groEL)
Exosomal proteins of colorectal cancer cells
BN1208_0263 (groEL)
Exosomal proteins of bladder cancer cells
BN1208_0263 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GIDA_C
Phage_GP20
MukE
Motif
Other DBs
NCBI-ProteinID:
CEZ19157
UniProt:
A0A0D6EU65
LinkDB
All DBs
Position
1:complement(239419..241071)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVRFGDDVRQKMITGVNILANAVKVTLGPKGRNVVLERSFGAPTITKDGVSVAKEI
ELRDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQAIIREGMKSVAAGMNPMDLKRGI
DKAVEAGVAELKKLSKPCTTSKEIAQVGSISANSDHSIGQIIADAMDKVGKEGVITVEDG
SGLTNELDVVEGMQFDRGYLSPYFINNSDRQIALLDNPFILLHDKKISNIRDLLPALEQV
AKSSRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGATV
ISDEVGLKLETIKIEDLGQAKRIEVGKENTIIIDGAADEKNIKSRIAQIKTQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGATTEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARDAIAKVKGENADQEAGVRIVLRAVEEPLRQIVANAGVEPSVVVNNVVAGKGNYGFNA
ANETYGDMVEMGVLDPTKVTRSALQHAASVAGLMLTTDCMIADLPKDDTPAMGGGDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaagatttggtgacgatgttcgccaaaagatgattaccggtgta
aatattttagcaaatgcagttaaagtcacactcggccctaaagggagaaatgttgtgtta
gaacgttcattcggagcaccaacgatcactaaagatggtgtatcagttgcaaaggaaatc
gaacttagagataaatttgaaaacatgggcgcgcaaatggttaaagaagttgcatctaaa
acttctgatatcgcaggcgatggcacaactacggcaacagtattggctcaagcgattatt
cgcgaaggtatgaaatcagtagctgcaggcatgaatccaatggatcttaaaagaggtatc
gataaagctgttgaggctggcgttgctgagcttaaaaaattaagtaagccatgcacaaca
agtaaagaaattgctcaagtgggttcaatctcagctaactctgatcactctataggacaa
atcattgcagacgcgatggataaagtaggtaaagaaggtgtgattacagttgaggatggt
tcaggcttaacaaatgaattagatgttgtagagggtatgcaatttgatcgtggatatcta
tcaccttacttcattaataattcagatcgacaaattgcattattagataatccttttatt
cttttacatgataaaaaaatatctaatatcagagatcttcttcctgcgctagagcaagta
gctaagtcaagccgccctctcctgattatcgctgaagatattgaaggtgaagcgctggct
actttagttgtaaataatattcgcggcatcttaaaaactgtcgctgttaaagcgccaggt
tttggtgataggagaaaagcaatgcttgaagatattgcaattcttacaggtgctacagtg
atttcagacgaagtaggtttgaaattagaaacgattaagattgaagatttaggtcaagcg
aaaagaattgaagtgggcaaagaaaacactatcattattgatggtgctgctgatgagaag
aatattaagtcacgtattgctcaaatcaaaacacaaattgaagaagctacgagcgactac
gacaaagaaaagcttcaagaacgtgttgcaaaacttgcaggcggcgttgctgtaattaaa
gtgggcgcaacgaccgaaattgaaatgaaagaaaaaaaagcacgtgttgaagatgcactc
cacgcgacaagagctgctgttgaagaaggtattgttgctggcggtggcgttgctttaatt
agagcgcgtgatgcgattgcaaaggttaaaggtgaaaatgcagatcaagaagctggtgtt
cgtattgtgcttcgtgctgttgaagagcccttaagacaaattgttgctaatgctggtgta
gaaccgtctgtagtagttaataatgtggtggctggtaaaggcaactacggatttaacgcg
gcaaacgaaacttatggtgacatggttgagatgggggtgttagaccctactaaagtcact
cgctctgcattacaacatgcagcatctgttgcaggtcttatgttaacaactgactgtatg
atcgctgatcttcctaaagatgacactccagcaatgggcggtggtgatatgggtggtatg
ggtggcatgggtggtatgggcggtatgatgtaa
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