Drepanopeziza brunnea: MBM_04678 Help Entry MBM_04678         CDS       T03105                                  Name (RefSeq) RNA helicase   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism mbe  Drepanopeziza brunnea Pathway mbe03013   Nucleocytoplasmic transport mbe03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:mbe00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     MBM_04678    03015 mRNA surveillance pathway     MBM_04678  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mbe03019]     MBM_04678 Enzymes [BR:mbe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      MBM_04678     5.6.2.5  RNA 5'-3' helicase      MBM_04678 Messenger RNA biogenesis [BR:mbe03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      MBM_04678    mRNA cycle factors     Common to processing body (P body) and stress granule      MBM_04678 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase Viral_helicase1 SLFN-g3_helicase Helicase_RecD PIF1 AAA_22 nSTAND3 ATPase AAA_16 PhoH AAA_25 Motif Other DBs NCBI-GeneID:  18760613 NCBI-ProteinID:  XP_007292567 UniProt:  K1WVQ7 LinkDB All DBs Position Unknown AA seq 1098 aa AA seqDB search MEGAFTHLGNHLISDSAAAINAGADDLSTLDPDEALLYGQYGGRGGLGPSRRRDDDDDNA TEVFDDDDTESLISTPTTGMETMGLRGSDEEKELPAHACAYCGIHSPSSVVKCLGCTKWF CSARGNATSSHIVNHLVRARHKEVQLHPLSTLGDTVLECYICGTKNVFLLGFIPAKSDTV VVLLCRQPCASTPSSKDMSWDISRWQPLIEDRSFLPWLVPVPTDAEQLRARHLTPPMIAK LEEMWKDNASATIQDLEKAAGLDDDPAPVLLKYDDAYQYQNVFGPLVKIEADYDRKLKEA QSEDGLIIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGELRPFWEGVGYVVK IPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAIDEMSVSG YIFHKLLGHEVAAAPMKIQMPKKFTVPGLPELNNSQINAVKSVLQKPLSLIQGPPGTGKT VTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVQSSVGFL SLHEQVRMNDSNLELTKLSQLKSELGELSSQDEKKFKTLTRGAEREILTNADVICCTCVG AGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAG LNQSLFERLVQLGQNPIRLDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIRCDVDFPW PVSDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPADIGVITPYEGQ RSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRL NVALTRAKYGLVILGNPKVLSKHPLWHHLLLHFKERDCLVEGPLSNLQTSLLQFSRPKST YRGPQRYQMSHASFNGRSGTNGKAPRDFSDAGSMMGYVPDDVSSVHSSALGGAGLGSAYP QMFSQFAPESWPNLPGLDLRVRSSGQKGRGRPAESVAGESIAASELTDTTSSVVDGKGIG QGGVSLGGGEPAQKQTSLNQSDRLKRYVESGGRIADYKNGGDAGSVFGSSSLLGGRRLED DEKSVSTAFASQIGGGYD NT seq 3297 nt NT seq  +upstreamnt  +downstreamnt atggagggcgccttcacccacctcggaaaccaccttatctccgactctgctgctgcgata aatgccggcgcagatgatttgtcgaccctcgatccagatgaagcactcctatatggacag tatggaggacgcggcggtctgggacccagcagacgtagggacgatgacgatgataacgcg accgaagttttcgacgatgacgacactgagagcttgatcagtacgccaacaactgggatg gagacgatgggcttgagaggttccgatgaagagaaggagctcccagctcacgcttgcgca tactgtgggatccactctccgagctctgttgtgaaatgcctgggatgcacgaaatggttc tgcagcgcccgtggtaatgcaacgtcttctcacatcgtcaatcatctcgtccgagctaga cacaaggaggtccagctccacccgctttcgacccttggagataccgtcctggagtgctat atttgtggcaccaagaacgtcttcctcctcggttttatccccgcgaagtccgataccgtc gtagtccttctttgccgccaaccttgtgcttctacgccgtcctcgaaggacatgagttgg gatatttcaagatggcaacctttgatcgaagaccgctcattcctcccttggctcgtaccg gtccctacggatgccgaacagctgcgcgcaagacatctcactccccctatgattgctaag ttggaggagatgtggaaggacaatgctagtgccaccatccaggatctcgagaaggccgct ggactcgatgacgaccctgccccggtcctacttaagtacgacgatgcataccaataccaa aatgtttttggaccacttgtcaaaattgaagccgactacgatcgcaagttaaaggaggcg caatctgaggacggtctgattattcgatgggactacggtctgaacaacaaacatctggcg agcttcgttttgcccaagattgagttgggcgatgtcaagctggcagtgggagatgagatg cgcctcaagtacaaaggagagcttcgacctttctgggaaggagttggatatgtcgtcaag atccccaacaaccagtcggacgaggttaccatcgagctgcgaaaggttggaaacgataaa tctgttcctacagaatgtacccataacttctcggccgactacgtctggaaggccacttcg tatgaccgcatgcaatttgctatgaagacctttgctatcgacgagatgagtgtatccggt tacattttccacaagcttttaggtcacgaggttgccgcggctcccatgaagatccagatg cccaagaaattcacagttccgggacttcctgagctgaacaacagtcaaataaatgcggtc aagagcgtcttgcagaagcctctcagtctgatccaaggccctcctggtactggtaagacc gttacctctgcgacagtcatttaccacttggccaaggtcaatggtggtcaggttcttgtc tgcgctccttcaaacgttgctgtggaccagttgtgtgagagaatccaccgcactggcttg aaggttgtccgtctcaccgccaagtcccgcgaggatgttcagtcgtcagttggattcttg tctctccatgagcaggtccgcatgaacgacagcaatctggaacttacaaagctctctcaa ttgaagagcgaacttggcgaactctcaagtcaggatgagaaaaagttcaagaccctcacc cggggtgctgagcgtgagattctaaccaatgctgatgtcatttgctgcacttgtgttggt gctggtgatccccgactcgcgaagatgaagttccgaactgtccttattgacgagtctact cagtccgccgagcctgagtgtatgatccctcttgtccttggttgcaagcaagtcgtcttg gttggagatcatcaacaattgggccctgtcattatgaacaagaaagctgccaaggccggt ctcaaccagtcgctctttgaacgacttgtccagctgggccaaaatcccatccgcctcgat gtccaataccgcatgcacccttgtctttccgaatttccctcaaacatgttctacgaagga tccctccaaaatggtgtcaccatggtccagcgcattcgctgcgacgtcgatttcccatgg ccagtcagcgacactcctatgatgttctggtctaaccttggcaatgaagaaatctcagca tccggaacctcttatctcaatcgtactgaggcttccaatgttgagaaaattgttactcgt ttcttcaaggctggcgttcaacccgcagacattggtgtcatcactccctacgaaggtcaa cgcagttacgttgtcagctccatgcagaacaccggtaccttcaagaaggagaactacaag gagattgaagttgcctccgttgacgctttccagggtcgagagaaggacttcattgttctg tcatgcgttagatccaacgatcaccaaggtatcggtttcttaagcgatcctcgtcgtctc aatgttgctcttactcgtgccaagtacggtcttgtcatccttggcaaccccaaggttctc tccaagcacccattgtggcatcacctgttgttgcatttcaaggagcgcgattgcctggtc gaaggccctctctcgaacttgcagacctccctgttgcaattcagccgcccaaagagtacc tatcgcggtcctcagcgttaccagatgtcccacgcctctttcaacggacgctccggcaca aatggcaaggctccccgtgactttagcgacgccggctcgatgatgggctatgttcctgac gatgtttcctcggttcactcttctgctctcggaggcgccggtctcggctcggcctaccct cagatgttctcccagtttgcccctgaaagttggcccaatcttcccggtcttgatcttcgc gtccgttccagcggtcagaagggccgaggtcgtcctgctgagagcgttgctggcgaatcc attgccgctagcgagcttaccgataccaccagcagcgtcgtcgacggcaagggtattggc caaggtggcgtcagccttggcggaggggaacctgcccaaaagcagaccagcttgaatcag tccgatcgcttgaagcgttacgtcgagtctggaggtcgcattgccgactataagaatggc ggcgacgcaggcagcgtcttcggaagcagctccttgttgggcggccgtcgccttgaggac gacgaaaagagtgtttccactgcgtttgcgagtcaaatcggaggtggctatgattga

DBGET integrated database retrieval system