KEGG   Monosiga brevicollis: MONBRDRAFT_38871
Entry
MONBRDRAFT_38871  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K03681  exosome complex component RRP40
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_38871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_38871
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MONBRDRAFT_38871
SSDB
Motif
Pfam: RRP40_S1 KH_6 Rrp40_N
Other DBs
NCBI-GeneID: 5895011
NCBI-ProteinID: XP_001749819
JGI: 38871
UniProt: A9VAP4
LinkDB
AA seq 233 aa
MAEGTGPRVVVPGDRFPLPDSGKVVLGPGLTTQQSSHGSEGVVTHGGILRQKGEATFWVD
IATHNPQTAEGDQVLGIIIGNAGEGFLVDIGGASNALLPGLAFEGATRRNRPRLNPGDLV
LARLKVANRDMDPELTCVTSGGKSAGMGHLEGGLLREISLGLCRRLRGKNCRVLTELGSR
KKFELCVGMNGRMWLKTEAPMDAVLLANAIEASELMSDKQVTKLVNRISSGWS
NT seq 702 nt   +upstreamnt  +downstreamnt
atggcagaggggacgggcccacgcgtggtggtgccgggtgatcggtttcccttgccggac
tcgggcaaggtggtgctgggtcccggtttgacaacccaacagagctcgcacggcagcgag
ggcgtcgtcacacatggcggcattcttcggcaaaagggtgaggccaccttttgggtagac
attgccacacacaaccctcagacagccgagggtgaccaagttcttggcatcatcattggc
aatgccggcgaaggttttctagtggacatcggaggtgccagcaatgccttgttgccgggc
ctagcattcgagggcgcgacgcgccgcaatcgcccccgacttaatccgggggacctagtg
ctggcgcggttgaaggtggcgaatcgtgatatggaccccgagctgacctgtgtgacatca
ggtggtaaaagtgccggcatgggccatttggaaggcggcctgcttcgcgaaatctcgctt
ggtctctgccgcaggttacgaggcaagaactgccgggtactgacggagctcggctcacgc
aagaagtttgagttgtgtgtgggcatgaacgggcgcatgtggttaaagacagaagccccc
atggacgccgtgctgttggccaatgccattgaggcctccgaactcatgtctgacaagcag
gtcaccaagcttgtgaaccgcattagctctggctggtcctaa

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