Monosiga brevicollis: MONBRDRAFT_38871
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Entry
MONBRDRAFT_38871 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K03681
exosome complex component RRP40
Organism
mbr
Monosiga brevicollis
Pathway
mbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MONBRDRAFT_38871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbr03019
]
MONBRDRAFT_38871
Messenger RNA biogenesis [BR:
mbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MONBRDRAFT_38871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP40_S1
KH_6
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
5895011
NCBI-ProteinID:
XP_001749819
JGI:
38871
UniProt:
A9VAP4
LinkDB
All DBs
AA seq
233 aa
AA seq
DB search
MAEGTGPRVVVPGDRFPLPDSGKVVLGPGLTTQQSSHGSEGVVTHGGILRQKGEATFWVD
IATHNPQTAEGDQVLGIIIGNAGEGFLVDIGGASNALLPGLAFEGATRRNRPRLNPGDLV
LARLKVANRDMDPELTCVTSGGKSAGMGHLEGGLLREISLGLCRRLRGKNCRVLTELGSR
KKFELCVGMNGRMWLKTEAPMDAVLLANAIEASELMSDKQVTKLVNRISSGWS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggggacgggcccacgcgtggtggtgccgggtgatcggtttcccttgccggac
tcgggcaaggtggtgctgggtcccggtttgacaacccaacagagctcgcacggcagcgag
ggcgtcgtcacacatggcggcattcttcggcaaaagggtgaggccaccttttgggtagac
attgccacacacaaccctcagacagccgagggtgaccaagttcttggcatcatcattggc
aatgccggcgaaggttttctagtggacatcggaggtgccagcaatgccttgttgccgggc
ctagcattcgagggcgcgacgcgccgcaatcgcccccgacttaatccgggggacctagtg
ctggcgcggttgaaggtggcgaatcgtgatatggaccccgagctgacctgtgtgacatca
ggtggtaaaagtgccggcatgggccatttggaaggcggcctgcttcgcgaaatctcgctt
ggtctctgccgcaggttacgaggcaagaactgccgggtactgacggagctcggctcacgc
aagaagtttgagttgtgtgtgggcatgaacgggcgcatgtggttaaagacagaagccccc
atggacgccgtgctgttggccaatgccattgaggcctccgaactcatgtctgacaagcag
gtcaccaagcttgtgaaccgcattagctctggctggtcctaa
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integrated database retrieval system