Marinobacter sp. BSs20148: MRBBS_0005
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Entry
MRBBS_0005 CDS
T02323
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mbs
Marinobacter sp. BSs20148
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbs03032
]
MRBBS_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
mbs03400
]
MRBBS_0005 (gyrB)
Enzymes [BR:
mbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MRBBS_0005 (gyrB)
DNA replication proteins [BR:
mbs03032
]
Prokaryotic type
DNA Topoisomerases
MRBBS_0005 (gyrB)
DNA repair and recombination proteins [BR:
mbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MRBBS_0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Rad1
Motif
Other DBs
NCBI-ProteinID:
AFP28943
UniProt:
M1FF05
LinkDB
All DBs
Position
5453..7867
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AA seq
804 aa
AA seq
DB search
MSESAYNSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGHCTEI
GIRIHPDESVSVHDNGRGIPVDLHEGEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVG
VSVVNALSSVLTLTIRRSGKVYEQTYNHGVPAAPLHEVGTTDASGTKVHFIPSEATFTNI
KFHYEILAKRVRELAFLNSGVRIRLTDERSGKEELFEYEGGLRAFVEHLNTNKTPINKVF
YFTQQREDGIEVEVAMQWNDAFQENIYCFTNNIPQRDGGTHLVGFRTALTRSLNSYIEHE
GLGKKAKVSTSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQELYQSFAAY
LQEQPSEARLIVNKMIEAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPALSEL
FIVEGDSAGGSAKQGRERRNQAILPLKGKILNVEKARFDKMLSSAEVGNLITALGCGIGR
EEFNVEKLRYHSIIIMTDADVDGSHIRTLLLTFLFRQMREVIERGHVFIAMPPLYKVKRG
KQEQYLKDENARESYLTQTALEGAQLFVNADAPAIKDSALETMVKDYQAVMAMIDRLSRA
YPSKVLAQMLHNNTLTPEQLKDENTVASWVGRLGEHLELDTRTGTKYVFSVHHDTERDLY
LPMVTVHLHGMAHEHVFSHTFFEAPSYKAIARLGETLDALVEEGAYVQRGERKQVVLSFE
GALAWLMKEAQRGLTLQRYKGLGEMNPEQLWDTTMDPESRRMMKVTIADAFAADQMFTTL
MGDDVEPRRNFIQTHALEVTNLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcagcctacaattcctccagtatcaaagtactgaaaggcctggacgccgtg
cgcaagcggcctggtatgtacatcggcgatacggacgacggcaccggcctccaccacatg
gtgttcgaactggtagacaactccattgacgaagcgctagccgggcactgtacagaaatc
ggaatccgtatccaccccgacgaatccgtcagcgtgcacgacaatggtcgcggtattcca
gttgatctgcacgaaggcgaaggcgtttctgctgccgaagttatcatgaccgtacttcac
gccggcggtaagtttgacgacaacacctataaagtgtcgggcggtcttcacggtgtgggt
gtgtctgttgttaatgcgctctcgtcggtgttgacgttaaccattcgccgcagcggcaaa
gtctacgagcagacttataaccacggtgttcctgcggcgcctttgcacgaggtcggcact
actgacgctagcggcaccaaggtgcacttcattccttcagaagctacgttcaccaacatc
aagtttcactacgagattctggcaaaacgggtacgggaactggcgtttttgaacagcggt
gtccgcattcgcctgactgatgagcgcagtggaaaagaagaactctttgaatatgagggt
ggtttgcgggcgtttgtcgaacacctgaacaccaacaaaacccctatcaacaaggtgttt
tattttactcaacagcgtgaagacggcattgaagtagaagtggctatgcagtggaatgat
gcgttccaggaaaatatctactgttttaccaataatattccacagcgagacggcggtacg
cacctcgttggttttcgcacggcactaactcgttccttgaacagttacattgagcacgaa
ggcttgggtaagaaagccaaagtgagcacttccggcgacgacgctcgcgaaggcctgact
gcgatcatcagtgtgaaagtaccagacccaaagttttcttcccagaccaaagacaagttg
gtttcctccgaggtgaaaacggctgtagaacaggagctctatcagagctttgcagcatat
cttcaggagcagcccagtgaggcgcggctaatcgtcaataagatgattgaagccgcccgt
gcccgcgaagcagcgcgtaaagcccgtgatatgactcgccgcaaaggcgctttagatatt
gccggtctacccggaaaactggccgactgtcaggaaaaagatcctgctctttccgaacta
tttatagtggagggtgactccgcgggcggtagtgcaaagcaaggtcgggaacggcgaaac
caggcaattctgccgctgaaaggtaaaatcctgaatgtcgaaaaagcccgctttgacaag
atgctgtcatccgcagaagttggtaacttgattacggctctgggctgtggcattgggcgc
gaagagtttaacgttgaaaaactgcgctatcattctattatcatcatgactgacgccgac
gtagatggttcgcacatccgcactctgctgctgaccttcctgttccgtcaaatgcgtgaa
gtaatcgagcgtggccacgtgttcatcgccatgcccccgctttacaaagtaaagcggggc
aagcaagagcagtatctgaaggatgaaaatgcccgcgagagctatttaacccagaccgca
ttggaaggcgcgcagctgttcgttaacgccgatgcgcctgccatcaaggattctgctctg
gaaaccatggtgaaggactatcaggccgtgatggccatgattgaccgcctgtcacgcgct
tacccgtctaaggtgctggcgcagatgctgcacaacaacaccctcaccccagaacagctg
aaagacgaaaacacggttgccagctgggtaggtcgcttgggtgaacatctggaattggat
acgcgcactggcaccaaatacgtgttctcggtacatcacgacaccgagcgcgatctgtat
ttgccaatggtcacggttcatttgcacggtatggcccacgaacacgtgttcagccatacg
ttctttgaagcgccatcttacaaggccatcgcccgtctgggtgaaaccctggacgctctg
gttgaagaaggagcctacgttcagcgtggtgagcgtaagcaagttgttttgtcgtttgaa
ggcgctcttgcttggttgatgaaagaagctcagcgcggcctgacccttcagcgttataag
ggtctgggcgagatgaatccggaacagctgtgggacaccaccatggacccagaatcccgc
cgtatgatgaaagtgaccattgcagacgctttcgccgctgaccagatgttcaccacattg
atgggtgatgatgttgagccgcgccgtaacttcattcagacgcatgccctggaagtgact
aacctggatatctga
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