Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_1646
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Entry
JTY_1646 CDS
T00864
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JTY_1646 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbt03400
]
JTY_1646 (uvrB)
DNA repair and recombination proteins [BR:
mbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JTY_1646 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JTY_1646 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
DUF87
AAA_19
Helicase_RecD
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
BAH25934
LinkDB
All DBs
Position
1815224..1817320
Genome browser
AA seq
698 aa
AA seq
DB search
MRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVLLGATGTGKSATTAWLIERLQR
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQSGGEFVEQVIRPTGLV
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMAEDLTDYLLEMGIRVRYLHSE
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccggcggtcacttcgaggtggtcagtccgcatgctccggccggcgaccagccg
gccgcaatcgacgagctggagcggcggatcaacgcgggggagcgtgacgtggtgttgctc
ggcgccaccggcaccgggaagtcggcgaccaccgcgtggctgatcgaacgcctgcagcgg
cccaccctggtgatggcgcccaacaagacgttggccgcccagctggcgaacgaactgcga
gagatgttgccgcacaacgccgtcgagtacttcgtctcgtactacgactactaccagccg
gaggcgtatatcgcgcagaccgacacttatatcgaaaaggatagctccatcaacgacgac
gtggagcggctgcggcactccgcgacctcggcgctgctgtcgcgtcgtgacgtggtggtg
gtggcttcggtgtcctgcatctacggcctgggcacaccgcagtcctacctggaccgctcc
gtcgagctgaaggtgggcgaggaagtgccgcgcgatgggctgctgcggctgctggtcgac
gtgcaatacacccgaaacgacatgtcctttactcgcggctcgtttcgggtgcgcggcgac
accgtcgagatcatcccctcctacgaagagctggcggttcgcatcgagttcttcggcgac
gagatcgaggcgctgtactatctgcacccgctgaccggcgaggttatccgccaggtcgac
tcgctgcggatctttcccgctacccattacgtcgccggtccggagcggatggcgcatgcc
gtctcggccatcgaggaagaactcgccgagcgactcgccgagcttgagagccagggcaag
ctgctggaggcgcagcggctgcggatgcgcaccaactacgacatcgaaatgatgcggcag
gtcgggttctgctcgggcatcgagaactactcccgccacatcgacggtagggggcccggc
acgccgcccgcgaccctgctcgactatttccccgaggatttcctgctcgttatcgacgag
tcacatgtcaccgtgccgcagatcggcggcatgtacgagggcgacatctcccgcaagcgc
aacctggtggagtacggtttccggctgccgtcggcgtgcgacaaccgtccgctgacctgg
gaggagttcgctgaccggatcgggcagacggtgtatctgtctgccaccccggggccctac
gagctcagccagtccggcggcgagttcgtcgagcaggtgatccggccgaccggtctggtg
gacccgaaagtggtagtcaagccgaccaaagggcagatcgacgacctgatcggcgagatc
cgcacacgggcagacgccgaccagcgggtgctggtgacgacgctgaccaagaagatggcc
gaagacctcaccgactacctgctggagatgggcattcgggtgcgctacctgcattcggag
gtcgacacgttgcgccgggtcgagttgttgcgccagctgcgtctgggtgactacgacgtg
ctggtcggcatcaacctgctccgcgagggcctagacctgcccgaggtgtcgctggtggcg
atcctcgacgccgacaaagaaggattcctgcggtcaagccgcagcctgatccagaccatc
ggacgcgccgctcgcaacgtgtccggcgaggtgcacatgtacgccgacaaaatcaccgac
tcgatgagggaagccatcgacgagaccgaacgccggcgggccaagcagatcgcctacaac
gaggccaacggaatcgacccacagccgctgcgcaaaaagatcgccgacatcctcgatcag
gtctatcgggaggccgacgacaccgccgtcgtcgaggtcggcggatccgggcgcaacgca
tcccgcggccggcgggctcagggtgagcccggccgggcggtcagcgccggcgtgttcgag
ggccgcgacacctccgccatgccgcgcgctgagctggccgacctaatcaaagacctcacc
gcacagatgatggcggccgcgcgcgacctgcagttcgagctggcggcccggttccgcgac
gagatcgccgacctcaagcgggagctgcgggggatggacgcggccggcctgaagtga
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