Mycobacterium tuberculosis variant bovis BCG ATCC 35743: BCGT_3160
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Entry
BCGT_3160 CDS
T03796
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mbx
Mycobacterium tuberculosis variant bovis BCG ATCC 35743
Pathway
mbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCGT_3160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbx03400
]
BCGT_3160
Enzymes [BR:
mbx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BCGT_3160
DNA repair and recombination proteins [BR:
mbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCGT_3160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Nudix_N_2
zf-FPG_IleRS
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AHM09079
LinkDB
All DBs
Position
3343727..3344494
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AA seq
255 aa
AA seq
DB search
MPEGDTVWHTAATLRRHLAGRTLTRCDIRVPRFAAVDLTGEVVDEVISRGKHLFIRTGTA
SIHSHLQMDGSWRVGNRPVRVDHRARIILEANQQEQAIRVVGVDLGLLEVIDRHNDGAVV
AHLGPDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPTA
PVSAVADPRRLVTRARDMLWVNRFRWNRCTTGDTRAGRRLWVYGRAGQGCRRCGTLIAYD
TTDERVRYWCPACQR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggcgacaccgtctggcacaccgcggccacgttgcggcggcatctggccggt
cgcacgttgacacgttgcgacatccgagtgccacggtttgccgccgtcgacctcaccggc
gaggtagtggacgaggtgatcagtcggggcaagcacctgttcatccgaaccgggacagcc
agcattcattcgcatctgcagatggacggcagctggcgggtcggcaaccggccggtgcgg
gtggatcatcgggcgcgaatcattttggaagccaaccagcaagaacaggccatccgggtg
gtcggcgtcgacctaggcctgttggaggtcatcgaccggcacaacgacggcgccgtcgtc
gcacacctaggacctgatctgctggccgacgattgggacccgcagcgtgcagccgccaac
ctgatcgttgccccggaccggcccatcgccgaggcactgctcgaccagcgggtgctcgcc
gggatcggcaacgtgtattgcaacgaactgtgcttcgtcagcggagtattgccgacggcc
ccggtgagcgcggtcgccgacccgcgccgcctggtcacccgcgcccgagacatgctgtgg
gtcaaccgcttccgctggaatcggtgcaccactggcgatacccgggccggccggcgactg
tgggtctacgggcgggccgggcagggttgccgccgctgcggcacgctcatcgcctacgac
actaccgacgagcgggtgcggtattggtgcccggcctgccagcgctga
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