Methylorubrum extorquens CM4: Mchl_2581
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Entry
Mchl_2581 CDS
T00809
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mch
Methylorubrum extorquens CM4
Pathway
mch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mchl_2581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mch03400
]
Mchl_2581
Enzymes [BR:
mch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mchl_2581
DNA repair and recombination proteins [BR:
mch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mchl_2581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ACK83422
UniProt:
B7L2D7
LinkDB
All DBs
Position
2713737..2715194
Genome browser
AA seq
485 aa
AA seq
DB search
MGEPLENPSPAEGGGRFGGGIHVVSLAPGADLSGFRTAARRLIAAEIPPKNIVWQTEAPS
LFGAESGSVDGPPLRLPRAVTELIPMVVPHRDPERYGLLYALLWRVLHGERALMDVLSDP
LVHRLHRMRKAIGRDLHKMHAFLRFRRVPGEGGERFVAWFEPDHHILGAAAPFFVDRFRG
LTWSILTPEGSAHWDGTLRFGPPGRREDVPEGDGFEAGWRDYYESTFNPARLNLNAMRAE
MPRKYWRNMPETAAIPALVRAASARAQAMIEKEPTMPVKRDPVRAVAKMAQDEPDSLEAL
NAIIARSEPLVPGATQAVLGEGPVGARIAFVGEQPGDQEDRQGRPFVGPAGQLLSRALEE
AGIDRGEAYLTNAVKHFKFTLRGKRRIHEKPTAGEVSHYRWWLEKELDFVAPKLVVALGA
TAVLSLTGKQIPITRARGPAEFGRPFAGFITVHPSYLLRLPDEAAKAAAYQAFVDDLRRA
NALAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagccgttggaaaacccctcccccgcagaggggggagggcgttttggcggcggc
atccatgtcgtcagtctcgcccccggcgcagatctttcggggtttcgcaccgcggcgcgg
cgcctgatcgcggccgagatcccgccgaaaaacatcgtctggcagaccgaggctccgagc
ctgttcggcgccgagtccggctccgtggacggcccgccgttgcggcttccccgcgcggtg
accgagctgatcccgatggtggtgccgcaccgcgatcccgagcgctacggcctgctctac
gccctgctctggcgcgtcttgcacggtgagcgggcgctgatggatgtcctgagcgatccg
ctcgtccaccgcctccaccggatgcggaaggccatcggccgcgacctgcacaagatgcac
gccttcctgcgcttccgccgggtaccgggggaggggggcgagcgcttcgtggcgtggttc
gagcccgatcaccacatcctgggggccgcggcacccttcttcgtcgatcgcttccgcggg
ctgacatggtcgatcctgacgccggaagggtcggcgcattgggacggtacgctccgcttc
ggtccgcccggccgccgcgaggatgtgccggagggcgacggcttcgaggccggttggcgc
gactattacgagagcaccttcaatccggcccggctcaacctcaatgccatgcgtgccgag
atgccccgcaagtactggcggaacatgccggagacggcggcgattcctgccctcgtgcgg
gccgcgagcgcccgcgcgcaggcgatgatcgagaaggagccgacgatgccggtcaagcgc
gaccccgtccgcgccgtggcgaagatggcccaggatgagccggattcgctggaagccctc
aacgccatcatcgcccgctccgaaccgctggtgcccggcgccacccaggccgtgctcggc
gaaggaccggtcggcgcgcggatcgctttcgtcggcgagcagccgggcgatcaggaggat
cgccagggccggcccttcgtcgggccggcggggcagcttctctcccgcgcgctggaagag
gcggggatcgaccggggggaggcctacctcacgaatgcggtcaagcacttcaaattcacg
ctgcgcggcaagcgccgcatccacgagaagccaaccgcgggcgaggtgagccattaccgc
tggtggctcgagaaggagctggacttcgtcgcccccaagctcgtcgtggcgctgggggcc
accgcggtgctgtcgctgacgggcaagcagatcccgatcacccgcgcccgcggacccgcc
gagttcgggcggccgttcgcgggcttcatcacggtccacccctcctacctgctgcgcctg
cccgacgaggcggcgaaggcggcggcctatcaggccttcgtcgatgacctgcggcgggcc
aacgccctcgcggcgtga
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