KEGG   Momordica charantia (bitter melon): 111018188Help
Entry
111018188         CDS       T05045                                 

Definition
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mcha00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    111018188
Enzymes [BR:mcha01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     111018188
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     111018188
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 1257 aa AA seqDB search
MTELINFNVLSTLFDWIQRSKSSAKKRSKFRKFLDTFCSSADYFSAIRLILPTLDRERGT
YGLKESVLATCLIDALGISRDSDDALRLNNWRKGGAKTGANAGNFALVAAEVLQRRQGMT
PGGLTIKELNDLLDRLALSENSRAEKTAVLSTLIQKTNAQEMKWIVMIILKDLKLGVSEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRRKRHKRQDIEVGKAVRPQLASRVSNANAAW
KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYGRGMSDVIVENIIATRCIL
DGEMLVWDKSLNRFAEFGSNQEIARAAKDGLDSDRQLCYVAFDVLYVGDTSVIHRSLKER
HELLRDVVKPVKGRLEILVPNGGLNSDCAGDPSWSQRAYNADDVERFFKNTIENRDEGIV
IKDMGSKWEPGDRSGKWLKLKPDYVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERS
PSNAYPRRFISFCRVGTGLTDEDLDAVTNKLRPYFRKSEYPKKAAPSFYQVTNNSKERPD
VWIESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVH
SSNGNTQRGTDNSGWQDSNRKFIKSTGKRRKKSVSVVPSHLLQTDISGIKEDSLIFSNML
FYIVNVPPTHSLDSLHRLIVENGGTFSMNLNDSVTHSVAADTKAGIKYEAARRRGDVIHY
SWMLECCSQKKLLPLQPKHFLFLSDHSKKKLEEEIDAFSDSYFWDLELADLKQLLSNVSR
SEDVKAIDYYRGKYCPKDEWSIFVGFQIYFLPLRPSLKFDWDVLLELSMRRLKVEVSFRG
GKVSDNHVSATHVVVFCIPGSSVDCETVLKCFNEAEKHVILKNKIHIVAHQWLEDCLERA
HRLQEDAYSLKPNWKKSIEKLNSDIDSETPLASENTENQKISSPSNAYKDQGRNEAASGQ
HMLLHSTERSGGKKRGKSTARSMQKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDE
KTNAETENIGTPCSENLKTNELTKLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPT
ASARSMQKGKAGVEQGQRTRARTAKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTV
CPANSNTNEFIWPENCDSSHKGKVIEQDDLAEFKSNVPEIEISTRYNCQGIEESEKLEVM
TDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVQNNSEPTKKKVSYKDVASELLKDW
NT seq 3774 nt NT seq  +upstreamnt  +downstreamnt
atgacggagctcatcaacttcaatgttctatcaactctgttcgattggattcagcggagc
aaatcttccgccaagaagcgttccaagttccgcaagtttctcgacaccttctgcagttct
gccgactatttctccgccatccgcttgattctgcccaccctcgaccgggagcgcggcacc
tatggcctcaaggagtctgtactcgccacttgccttatcgacgctcttggcatctctaga
gactccgacgacgctcttcgtcttaacaattggcgcaaaggcggtgctaagactggagct
aatgccggcaatttcgctcttgttgctgccgaggttttgcagcgcaggcaaggaatgacc
cctggtggtctaacaattaaagagttaaatgatctgctggaccgtttggctttaagtgaa
aacagcagagcagaaaaaactgcagttctgtctactcttatacagaagacgaatgcacag
gaaatgaagtggattgtcatgataatcctcaaagatctgaaactgggagttagtgaaaag
agcatttttcatgagttccatccagatgcagaagacttattcaatgtcacctgtgactta
aaactggtttgtgaaaagctaagggatcgtagaaaaaggcataagcgtcaggacattgaa
gttggaaaagctgtgcgaccgcagctggcttcaagagtttccaatgcaaatgctgcatgg
aagaagcttcatgggaaggaagttgtagtcgaatgcaagtttgatggtgaccgtattcaa
attcataagaatggaactgaaatacacttcttttcaaggaactttctcgatcactcagaa
tatggacgtggaatgtctgatgttattgttgaaaatattattgccactaggtgtatactt
gatggtgaaatgttggtgtgggataaatctttaaaccgttttgcagagtttggctcaaac
caagaaatagcaagggcagcaaaggatggattggacagcgatcgtcagttatgctatgtt
gcgttcgatgttctttatgttggagatactagtgttattcacaggagtttgaaagaaaga
catgagcttctgagagatgtagtcaagcctgtgaagggacgattggaaattttagtacct
aatggtggtcttaatagtgactgtgctggggatccttcttggtcacaaagagcttataat
gccgatgatgtggaaagattttttaaaaataccattgaaaatagagatgaaggtattgtt
attaaggacatgggttccaagtgggaacctggtgatcgtagtgggaagtggttaaaatta
aagcctgattatgttcgtgctggatctgatttggatgccctcatcataggaggttactat
ggctctgggcgacggggtggggaggtagctcaatttctgatgggtcttgctgagcgttca
ccctcgaatgcatatcccagacgatttatttccttctgccgagtaggaactggacttact
gatgaggatttagatgctgttacaaacaaactgaggccttattttaggaaaagtgaatat
ccaaagaaggctgcaccgagcttttaccaagttacaaataattcaaaagaaagaccagat
gtttggattgaaagccctgagaaatcaatcattctttccattaccagtgatatacgaact
ataaagtctgaggtctttgcagcaccatatagcctaagatttccgcgcatagaccgtgtt
cgatatgacaaaccttggcatgaatgtcttgatgtgcaatcttttgtagagttggttcat
tcaagtaatggtaacacgcaaaggggcacagataatagtggctggcaagatagtaatcga
aagttcattaaatctactggaaagagaaggaagaagagcgtatctgttgttccttctcat
ttacttcagaccgatatttctggcattaaagaggactccttgattttctcaaatatgtta
ttttacattgttaatgtgcctccaacccattctctcgattccctgcacagattgattgtg
gagaatgggggtacattctctatgaatttgaacgattctgttacacactctgttgctgct
gacaccaaggcaggcatcaaatatgaggctgcaagacgtcgtggcgatgttattcattat
tcttggatgttggaatgttgttcccagaagaaactgctgcctctacagcctaagcatttt
ctctttctctctgaccattcaaagaaaaaattggaagaggaaattgatgcattttctgac
tcgtacttctgggatcttgaacttgcagacctgaaacagctattaagcaacgttagtaga
tcagaagatgtgaaagctattgactactacagggggaaatactgtccaaaagatgaatgg
agtatatttgttggtttccaaatttacttccttcctttaagaccatctttgaaatttgat
tgggatgttctgttggagctttcaatgaggagattgaaggttgaagtttcattcagaggt
ggaaaagtcagtgataaccatgtttctgctacccatgttgtagtcttctgtatacctgga
tcttccgtggattgtgaaacagtattgaaatgcttcaatgaagcggagaaacatgtcata
ttgaaaaataagattcatattgttgcacatcagtggttggaagactgtttggagagggcc
cacaggttacaagaagatgcatatagcttgaaacccaattggaaaaagtcaatcgaaaag
ttaaattctgacatagattctgagacaccattggcctcagaaaatacagaaaaccagaaa
atttcttctccttccaatgcatataaagatcaaggaagaaatgaagctgcttcaggacaa
cacatgctcttacattcaactgagagatctggtggcaagaaaagaggaaaatctactgca
aggagcatgcagaaagggaaattgagcgtcgaacaagttcgaagagctcgggcacgaaca
gccaaggggcctgcaaaaataagtgaagttgagtcagacagcagtgactataatgatgaa
aaaacaaatgcagagactgaaaatattggaacaccatgcagtgaaaacttgaaaacgaat
gagcttacaaagctggaaaactttgatccttcacgaaaaggcaagggcattgagcacgtg
cccttatgttcaaccgagagaactggtgagaagaaaagaggaagaagacctacacctact
gcaagtgcaaggagcatgcagaaagggaaagcaggcgttgaacaagggcaaagaactcgg
gcacgtacggccaaggggtctgcaaaaataggcggtgttgaatcagacagcagtgacact
actgatgataaaacaaatgcagaaggaaatggagtggagaaacgaaatattggaacagta
tgcccagcaaactcgaacacaaatgagtttatatggccagaaaattgtgattcctcacat
aaaggaaaggtcattgaacaagatgatcttgcagaatttaaatctaatgttccagaaatt
gaaatatctacaaggtacaattgccaaggcattgaagaatctgagaagctggaagtcatg
actgatccacttcaggccatgttattagatatggttcctagtcttggaatgagtgaaact
aaaagtagcagtactgttctcgaggagaagcagccagtgcaaaacaattctgagccaacg
aagaagaaagtgagctataaggacgttgccagtgaattgctcaaggattggtaa

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