Mycoplasmopsis californica HAZ160_1: MCAL160_0010
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Entry
MCAL160_0010 CDS
T03651
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mcm
Mycoplasmopsis californica HAZ160_1
Pathway
mcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCAL160_0010 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcm03400
]
MCAL160_0010 (recD)
Enzymes [BR:
mcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MCAL160_0010 (recD)
DNA repair and recombination proteins [BR:
mcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCAL160_0010 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
SH3_13
Viral_helicase1
UvrD_C_2
PIF1
UvrD-helicase
AAA_11
HHH_4
AAA_22
SLFN-g3_helicase
AAA_12
T2SSE
NACHT
PhoH
Helicase_RecD
AAA
AAA_14
MeaB
Motif
Other DBs
NCBI-ProteinID:
BAP00776
LinkDB
All DBs
Position
7161..9344
Genome browser
AA seq
727 aa
AA seq
DB search
MNNEVNANTKKGTKNQIQLRGMFKKIISGGESNNWLWALAIFVSDEGENHTVYCKGRALK
LMTHYDVVLSENFNDKYKNKNLVSLSISQPKNNEELKKVLLRTNTGIGRATIEKLDKQFG
EDWIDSFLKNPEIFKEKINEKTFTSLDNFFKTYTNKSYNFFLSHGLEKLYDALKIDFSEG
DLIEELKKINPYTLVYTHNYSFSKIDDLGIALELHNSIERLYALIYHSIEKEINSNNSTK
IKINYILEAVKTDFLNYSDKVILDAITYMINNAFIVYWGDTGLFSTHSIVRKENYIAVRL
SRLKKIALKISNYQAHSSISKLQQEAFMNAIINSVSVISGFPGTGKSFVIKNIIEFLISE
KLFKKEEIVIVTPTGRAAVNLKAKSGVDAKTIHSYFKISDTPFKSTLSCQLTENTHKVLV
IDEFSMVNTDLFYTVLYNSPDLEKLILVGDADQLPCIGAGNLLDDIIESNKFQTTKLVEI
FRTDHRDIAEHFLAVREFKEPRYNTENIEWYDANNIDFKDKLLSIYQEKVDRFGIQNVAL
LIPLHKTPHGTIKMNMLLQEWNLYRQNLNIEDIPSIKIGAGENAKIFYLGDKVVQNENDY
DLNVYNGEIGFIESIDKEGKKITINFDYKKIEYSRDQFIQYITLGYALTVHKFQGSESSC
VIFPVLPEYDYLFETKLIYTAVSRSKENLVILGDLGYYREKVLKGHKKEKTLTNFADSIQ
MEELWNL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaagtaaatgcaaatacgaaaaaaggaaccaaaaatcaaatccaattaagg
ggaatgttcaaaaaaataattagcggcggagagtcaaataattgattgtgagcattggca
atttttgtttctgatgagggcgagaatcacacagtttattgcaaaggtagagcattaaaa
ttaatgacgcattatgatgttgtgctgtcggaaaattttaatgataaatataaaaacaaa
aatctagtttcattatcaatcagccagccgaaaaataacgaagagctaaaaaaagtgcta
ttaagaactaatacaggtattggccgagcgacaatagagaaattggacaagcaatttgga
gaagattggatcgattcgtttttaaaaaatccagaaatatttaaagaaaaaataaacgaa
aaaacatttacttcattagataatttttttaaaacctacacaaacaaaagttataacttt
tttctaagccatggattagaaaagttatatgatgcattaaaaattgatttttcagagggt
gacttaattgaggaattgaaaaaaatcaatccttacacactcgtttacactcataattac
tcattttctaaaatagatgatttaggtatagcgttggaattgcacaacagcattgagcgt
ctttatgcattaatttatcattcgattgaaaaagaaattaattctaataactctacaaaa
ataaaaattaattacatattggaagctgttaaaactgattttttaaattatagtgataaa
gtaattttagatgctattacatatatgattaataatgctttcattgtatactgaggtgat
acaggattattttccactcattcgattgttagaaaagaaaattatatagccgttaggtta
tctagattaaaaaaaattgccttaaaaataagtaattatcaagctcatagcagtatttct
aaacttcaacaagaagcatttatgaatgcgattataaattcagttagtgttatttcaggg
ttcccgggcaccggaaaatcatttgtgattaaaaacattatagagtttttaataagtgaa
aaattattcaaaaaagaagaaatagttattgtaactcctactggaagagcggccgtaaac
ttaaaagctaagtcaggtgtagatgctaaaacaattcatagttattttaaaataagtgat
accccttttaaatcaaccttatcttgccaattaacagaaaacactcataaagtattggta
attgatgagttttcgatggttaatactgatttattttatacagtgctttacaattcgcca
gatcttgaaaaactaattttagtaggtgatgccgaccaattaccatgtataggggccggt
aatttgcttgatgatattattgaatctaataaatttcaaacaacaaaattggttgaaatt
tttagaacagaccacagagacatcgctgaacattttttagcagttagagaatttaaagaa
cctcgttataacaccgaaaacattgaatggtatgatgctaacaatattgattttaaagat
aaattattatccatttatcaagaaaaagtcgatcgttttggcatacaaaatgtcgcttta
ttaattccacttcataaaactcctcatggaacaattaaaatgaatatgttgttgcaagaa
tggaatttatatcgtcaaaacctgaatattgaagatataccttcaattaagataggtgcg
ggtgaaaatgctaaaattttttatctaggtgataaagtggtgcaaaatgaaaatgattat
gatttaaatgtctataatggtgaaataggttttattgaatcgattgataaagaaggtaaa
aaaatcactattaattttgattataaaaaaattgaatattcacgtgaccaatttattcaa
tatattaccttagggtatgcccttactgttcataaatttcaaggttcagaaagttcatgt
gttatattccctgttcttccagaatacgattatttatttgaaactaaattaatttataca
gctgtttctcgctcgaaagaaaatttagttatattaggtgatttaggatactatcgtgaa
aaagttttaaaaggtcacaaaaaagaaaaaacactaactaattttgcagattctattcaa
atggaggaattatgaaacttatag
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