Methylorubrum extorquens DM4: METDI2547
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Entry
METDI2547 CDS
T00947
Symbol
dnaX
Name
(GenBank) DNA polymerase III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi03030
DNA replication
mdi03430
Mismatch repair
mdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METDI2547 (dnaX)
03430 Mismatch repair
METDI2547 (dnaX)
03440 Homologous recombination
METDI2547 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdi03032
]
METDI2547 (dnaX)
03400 DNA repair and recombination proteins [BR:
mdi03400
]
METDI2547 (dnaX)
Enzymes [BR:
mdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METDI2547 (dnaX)
DNA replication proteins [BR:
mdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
METDI2547 (dnaX)
DNA repair and recombination proteins [BR:
mdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
METDI2547 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
RuvB_N
AAA_18
AAA_14
AAA_30
AAA_16
AAA_19
AAA_5
TsaE
AAA_assoc_2
SRP54
AAA_24
nSTAND3
Rad17
Motif
Other DBs
NCBI-ProteinID:
CAX24200
UniProt:
C7CK08
LinkDB
All DBs
Position
complement(2456221..2458101)
Genome browser
AA seq
626 aa
AA seq
DB search
MDETHGTLTDEPGLPGMPTPAPVPATTPYRVLARKYRPQTFDDLIGQGAMVRTLGNAFAA
NRIPQAWMLTGVRGVGKTTTARILARGLNYLRTGQPDTGPTVSMPELGQHCHAIMESRHM
DVLEMDAASHTGIDDVRGIIDGIRYSPVSARYKVYIVDEVHMLSEKAFNAFLKTLEEPPP
HAKFVFATTEIRKVPVTILSRCQRFDLRRVEADVLAAHLKKICAAEGVEAEDEALAAVTR
AAEGSVRDALSLLDQAIAHGAGAVSAAGVRDMLGLADRSRIVDLFEAVMRGDVPAAFAEI
RAQYDAGADPAVVLSDLAGFTHLVTRLKLVPGAEADPTLSEAERVRGVAFAGRLPVRALS
RAWQILLKALPEVQAAPRPLAAAEMAIVRLAYAADLPTPDEALRQLRADIASSEGNGAAR
PSLGRDGGSPMASHGSAALQMAPPAPQPSPRPTLAAVPSPVTAAAPQPASRPAPVAPAGP
RLGRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAPGGRQSLPTDLARALDA
WTGRRWLVALSKEQGAPTLAENTRAAEETRHQNAAAHPLVREVLSRFPGAQIVDVRDKAP
ETDSADAAANGAGPAAPPPEETDDDA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgcacggcacgctcaccgacgagccgggcctgcccggcatgcccaccccc
gcgcccgtgccggccacgacgccttaccgggtgttggcgcgaaaatatcgccctcagacc
ttcgatgacctgatcggccagggcgccatggtgcgcacgctgggcaacgcctttgcggcc
aaccgcatcccgcaggcgtggatgctcacgggcgtgcgcggcgtcggcaagacgaccacc
gcccgcatcctcgcccgcggcctcaactacctgcgcaccggccagccggataccggccct
accgtgtcgatgccggaactcggccagcactgccatgcgatcatggaatcccggcacatg
gatgtgctggagatggacgccgcctcgcataccggcatcgacgatgtgcgcggcatcatc
gacggcatccgctactcgccggtctcggcccgctacaaggtctacatcgtcgacgaggtc
cacatgctctcggagaaggcgttcaacgccttcctgaagacgctggaggagccgccgccc
cacgccaagttcgtgttcgcgaccaccgagatccgcaaggttccggtgacgatcctgtcg
cgctgccagcgcttcgacctgcgccgggtcgaggccgacgtgctcgccgcccacctgaag
aagatctgcgccgcggaaggggtggaggccgaggacgaggcgctcgccgccgtcacccgc
gccgccgagggctcggtgcgcgatgcgctctcgctgctcgatcaggccatcgcccatgga
gccggcgcggtctcggctgcgggcgtgcgcgacatgctcggcctcgccgaccgttcacgc
atcgtcgatctgttcgaggccgtgatgcgcggcgacgtgccggccgccttcgccgaaatc
cgcgcccagtacgacgcgggcgccgacccggcggtcgtgctctcggatctcgccggcttc
acccatctcgtcacccgcctcaagctcgtgccgggggcggaggccgacccgaccttaagc
gaggcggagcgcgtgcgcggcgtggcgtttgccgggcgcctgccggtgcgggccctgtcg
cgagcgtggcagatcctgctgaaggcgctgcccgaagtgcaggccgcgccccgcccgctc
gccgccgccgagatggcgatcgtgcggctggcctatgccgccgatctgccgacgcccgac
gaggccctgcgccagcttcgggccgacatcgcctcgtccgagggcaacggcgccgctcgc
ccgagtctcggacgcgacggcggctcccccatggcctcgcacggctcggccgcgctgcag
atggcgccacccgccccgcagccctcgcctcggccgaccctggccgcggtgccctccccc
gtcaccgccgcggcgccgcaacccgcatcgcgcccggctccggtggccccggccggtccg
cggctcgggcgcttcgaggacgtggtcgcccaggccgaggccgcccgcgacattgcgctc
aaggtggcgctggagcgtgacgtgcatctggtgcgcttcgaggaggggcggatcgagttc
cgcctcgcgcccggcggccggcagagcctcccgaccgatctcgcccgcgccctcgatgcc
tggaccggacggcgctggctggtggccctctccaaggagcagggtgcgccgacgctcgcg
gaaaacacgcgggcggccgaggaaacccgccaccagaacgccgccgcccacccgctggtg
cgggaagttctgtcgcgcttccccggcgcgcagatcgtggatgtgcgcgacaaggcgccg
gagaccgacagcgccgacgccgcggcgaacggcgccgggccggcagcccctccgcccgaa
gagacggacgacgacgcctga
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