Methylorubrum extorquens DM4: METDI3548
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Entry
METDI3548 CDS
T00947
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00540
Lipopolysaccharide biosynthesis
mdi01100
Metabolic pathways
mdi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
METDI3548 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
METDI3548 (kdsA)
Enzymes [BR:
mdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
METDI3548 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
Lipid A
METDI3548 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAX25190
UniProt:
C7C8P9
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All DBs
Position
3485224..3486072
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AA seq
282 aa
AA seq
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MPETAQTSGSVVQTGGVAFANHLPLALIAGPCQLEGRNHALEIAAALKEMAAKLGIGLVF
KSSFDKANRTSGRTARGVGLDEALPVFAEIRESLGLPVLTDVHEAEHCARAAQAVDILQI
PAFLCRQTDLLLAAAATGRAVNVKKGQFLAPWDMAHVAAKVTEAGNPNVIVTERGASFGY
NTLVSDMRSLPIMARVTGGAPVVFDATHSVQQPGGQGTTSGGQREFVAVLARAAVAVGVA
GVFIETHPDPDRAPSDGPNMVALADLPALIETLMAFDRLAKA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagactgcacagacttccggttccgtcgtccagaccggcggcgtcgccttcgcc
aatcatctgccgctggcgctgatcgccggcccctgccagctcgaagggcgaaatcacgcc
ctcgaaatcgctgccgctctcaaggagatggcggccaagctcggcatcggcctcgtgttc
aagtcgtccttcgacaaggccaaccgcacctccggccgcaccgcccgaggcgtcggcctc
gacgaggcgcttccggtcttcgccgagatccgcgagagcctcgggcttcccgtgctcacc
gacgtgcacgaggccgagcattgtgcgcgggcggcgcaagccgtcgacatcctgcagatc
ccggccttcctctgccgccagaccgacctcctgctcgccgcagcggccaccgggcgggcg
gttaacgtcaagaagggccagttcctcgcgccctgggatatggcccatgtcgcggccaag
gtgaccgaggccggcaaccccaacgtcatcgtcaccgagcgcggcgcctccttcggctac
aacacgctcgtctccgacatgcgctcgctgccgatcatggcccgcgtcaccggcggcgca
ccggtggtgttcgatgcaacgcactcggtgcagcagccgggcgggcagggcaccacctcc
ggcgggcagagggagttcgtcgcggtgctcgcccgcgccgcggtggcggtcggcgtggcg
ggcgtgttcatcgagacccatcccgatcccgaccgcgcgccctccgacgggccgaacatg
gtggccttggccgatctgcccgctttgatcgagaccctcatggcgttcgaccgtctcgcc
aaagcgtaa
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