Malus domestica (apple): 103448685
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Entry
103448685 CDS
T03194
Name
(RefSeq) protein SPA1-RELATED 3-like isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
mdm
Malus domestica (apple)
Pathway
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103448685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103448685
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
103448685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Pkinase
PK_Tyr_Ser-Thr
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
103448685
NCBI-ProteinID:
XP_008386180
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All DBs
Position
11:35874239..35880379
Genome browser
AA seq
899 aa
AA seq
DB search
MCVFWHSCCYRRITMEGSSESAGQNSDSSRGLNTSRVSNRNPRVHRAGRFGSSAEAFQDS
DLRKERDSVVVAHTDDLTNQGGLSGVCEDEVAVDRFVRAIEWGDVSLRQWLDKPDRSVDV
FECLHVFRQIVEIVNVAHSQGIVVHNVRPSCFVMSSFNHISFIESASCSDSGTDSPEDEL
NSPTEEIKDFHSLLHRNLRQQRRNLGREKFQSMTTPNALSETSCMQSSSIYAARESLVQE
SENGIRDRNVELEDKRQPFPMKHILLMETSWYTSPEEVSAGSSSCASDIYRLGVLLFELF
CPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPNSRPKMCELQQSEFLN
EPRVDLEEREAAIELREKIEEQELLLEFLLLIQQGKQESADKLQNTLSFLCCDINEVMKH
QITSKKKGSSIPQLVKEDDSTSSFPSMNIIDDDDSASGSRKRSRTGIWVHNVEESDDNLD
GQKTDTENQGVLSRSSRLMKNFKKLEAAYFLTRWRPVKQSAKPAKHSPISSSVVTERSSV
NNLQSKEQHSGGRRSGWIDPFLEGLCKYLSFSKLKVKADLKQGDLLNTSNLVCSLSFDRD
GEFFATAGVNKKIKVFECDTITNEDRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE
GVVQVWDVTRSQLFTEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSIGTI
KTKANVCCVQFPLDSSRSLAFGSADHKIYYYDLRNSKVPLCTLIGHNKTVSYVKFVDGTN
LVSASTDNTVKLWDLSMSSSRVIDTPVLSFTGHTNVKNFVGLSVSDGYIATGSETNEVFI
YHKAFPMPALSYKFQNTDSLSGHDTDDAAQFISSVCWRGQTSTLIAANSTGNIKILEMV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgttctggcattcatgctgctataggcggataacaatggaaggctcatccgag
tctgctgggcagaattctgatagctctagagggttgaatacttccagagtctcaaaccgg
aatccaagggttcatcgggctggacggtttggctcgtcggctgaggcatttcaggattcg
gatttgagaaaggagagagatagtgttgtggtggcacacactgatgaccttacaaaccag
ggtggattgtccggggtttgtgaggatgaggtggcggttgaccgttttgtccgagctatt
gaatggggtgatgttagcttgaggcagtggttggataaaccggatcgatctgttgatgta
tttgaatgcttgcatgtatttaggcaaatagtggaaattgttaatgtagcacattcgcaa
gggattgttgttcataatgtgcgaccttcatgtttcgtcatgtcatctttcaaccacatc
tcctttatcgagtctgcatcttgttcagattctggcactgattctcccgaggatgagtta
aacagcccaactgaagaaattaaggattttcactctctcttgcatcgtaatttgcgtcag
caacgaaggaacttaggaagagaaaaatttcagtctatgacaactccaaatgccttgtcg
gaaacgagttgcatgcagtcaagttcaatctatgcagcacgcgaatcgttggtacaagag
agtgaaaatggaatcagagaccgaaatgttgaactagaagataagagacaaccatttcca
atgaaacatatattgcttatggagaccagttggtatactagtccagaagaggtttctgct
ggatcgagttcatgtgcttcagacatttatcggttaggggttcttctttttgagttattc
tgtccactcagctcaagagaagaaaagagcaggacaatgtctagtctgagacatcgagtt
cttcctcctcaattgctgctgaaatggcctaaagaggcttcgttttgtttatggctactg
caccctgagccaaatagccggccaaaaatgtgtgagttgcaacaaagtgaattcctgaat
gaaccaagagttgatttagaagaacgtgaagcggcaatagagcttagagagaaaatagag
gagcaggaattattgctggaattcctgctgctcatacaacaagggaaacaggaatctgca
gataagttgcaaaatactctttcgtttctgtgttgtgatattaacgaagttatgaagcac
caaataacttctaagaaaaagggcagttcaatcccacaactggtgaaggaagatgattcg
acctcaagtttcccgtctatgaatattattgacgatgatgattctgctagtgggtccaga
aaaaggtccagaacaggcatctgggttcacaacgtagaggaaagtgatgataatttggat
ggtcagaagacggatactgaaaatcaaggtgttctctcgagaagttctagattgatgaag
aactttaaaaagctagaggcggcatattttttaacgagatggaggcccgtaaagcagtca
gctaaaccggctaaacattcaccaataagtagttctgttgtaactgaaagaagttctgtc
aataatttgcaatcaaaagaacaacatagtggaggtagacgaagtggttggatagatcca
tttcttgagggattgtgcaagtatctgtctttctcgaaattaaaagtgaaggcagatttg
aagcaaggggatcttttaaatacttcaaatctagtatgctcacttagttttgatcgtgat
ggagaattttttgctacagctggtgttaataagaaaatcaaagtatttgaatgtgacaca
ataacaaatgaggatcgtgatatccactatcccgtggttgaaatggctagcaggtcaaag
ctaagcagtatatgttggaatagttatatcaaaagccagattgcttcaagtaactttgaa
ggtgtggtgcaggtatgggatgttacaagaagtcaattgtttacggagatgagagaacat
gaaaggcgtgtatggtccattgatttttcatcagcagacccaacaatgttggctagcggg
agtgatgatggttctgtaaagctatggagtatcaatcagggagtaagtattggtacaatt
aaaacaaaggcgaatgtctgctgcgtacagtttccattggactctagtcgttcccttgcc
tttggttcagcggatcataaaatttactactatgatcttcgtaactcaaaggttcctctg
tgcacattgatcggacacaacaaaaccgtgagttatgtcaaatttgtggatgggacaaat
ctcgtttctgcgtccactgacaatacggtgaagctttgggatttgtcaatgtcctcatct
cgggtcattgacactccagttctatcattcaccggccacacgaatgtgaagaactttgtg
gggttgtcagtttctgatggttacattgctacaggctcagagactaatgaggttttcatc
taccacaaggcttttccaatgccggcattgtcatacaagtttcagaacacagactcactt
tccggccatgacacagatgatgctgcacagtttatctcttccgtttgttggcgaggccaa
acctccaccttaattgctgcaaattcgacggggaatataaaaattttggagatggtttga
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