Methylomonas denitrificans: JT25_017360
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Entry
JT25_017360 CDS
T04191
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mdn
Methylomonas denitrificans
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdn03016
]
JT25_017360
Enzymes [BR:
mdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JT25_017360
Transfer RNA biogenesis [BR:
mdn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT25_017360
Prokaryotic type
JT25_017360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMK78230
UniProt:
A0A126T858
LinkDB
All DBs
Position
3757037..3757954
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AA seq
305 aa
AA seq
DB search
MAKRKSGRDVHGIVLLDKRLGASSNQALQEVRRLFNANKAGHTGALDPLATGLLPLCFGE
ATKVSALMLDDDKRYQVTIQLGVMTDTGDSEGKIVAEMPVPALDDERLQACLQHFTGPIE
QVPPMYSALKHQGKKLYELAREGKTVDRQPRAITIYELHLLSVDTEAGQLTLDVFCSKGT
YIRSLAEDIGHWLGTCGTVTALRRTKAGMFDLEQAYTLQQLQAMDSEQLQNTLIALDAPL
QSIPDACLSLEQAEKIKQGQRIAFNGGMVGQVRIYSPQAFLGLGEILLDGKLAPKKLFHL
EDQAT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaagtccgggcgcgatgtgcatggcatcgtgctgctcgacaaacgttta
ggcgcatcgtccaatcaggcgttgcaggaagtcaggcgattgttcaatgccaataaggcc
gggcataccggggcgctggatccactagctaccggcttattgcccttatgctttggtgag
gcgaccaaggtgtcggcgttgatgctggatgacgataagcgttaccaggtaacgatacag
ctgggcgtgatgaccgataccggcgacagcgaaggtaaaatcgtcgccgaaatgccggta
ccggcgctggatgacgagcgattgcaggcttgtttgcagcatttcaccgggccgatagag
caggtgccgccgatgtattcggcgctcaagcatcaaggcaagaagttatatgagttggct
agggaaggcaaaaccgtagaccgacagcccagggcaatcactatttatgaattgcactta
ttaagtgtcgataccgaagcggggcaattgacgctggatgtattttgctccaaaggcact
tatatccgctcgctggccgaggatataggccattggctggggacttgcggcacggtaacc
gcgctacgcagaaccaaggcgggtatgttcgatctggagcaagcttataccttgcagcag
ttgcaggccatggactccgagcaattgcagaataccttgattgcgctggatgcgccgctg
caaagcatacccgacgcatgtttgtctttagagcaagccgaaaagatcaagcagggacag
cgtatagcctttaacggggggatggtcggtcaggtcagaatatactcgccgcaagccttt
ttggggttgggagaaatcctattggatggtaaactagcgccgaaaaaactatttcatttg
gaagatcaagcaacttga
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