Monodelphis domestica (gray short-tailed opossum): 100012573
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Entry
100012573 CDS
T01031
Symbol
PRPF8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100012573 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100012573 (PRPF8)
Spliceosome [BR:
mdo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100012573 (PRPF8)
Complex C
U5 SnRNP specific factors
100012573 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100012573
NCBI-ProteinID:
XP_001365062
Ensembl:
ENSMODG00000010480
LinkDB
All DBs
Position
2:complement(517151319..517169831)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGTPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLRTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggggtgtttccctacagagggccgggcacccctgtgcctggccctctggcacca
ctgccggactacatgtcagaggagaagcttcaggaaaaagcccgaaaatggcaacagtta
caagcaaaacgctatgccgagaagcggaaatttggatttgtagatgcacagaaggaagac
atgcccccggagcatgtcaggaagattatccgagatcatggggacatgaccaaccgaaaa
ttccgtcatgacaagcgagtctacctgggtgccctgaagtatatgccccatgctgtcctc
aagctcttggaaaacatgcccatgccatgggagcagattcgggatgtgcctgtcctatat
cacatcactggagcgatctcctttgtaaatgagattccttgggtcatcgagcctgtctac
atctctcagtgggggtccatgtggatcatgatgcgtcgagagaagagggacagacggcac
tttaagcggatgcgctttcccccatttgatgacgaagagccccccctggactatgcagac
aacatcctggatgtggagcctttggaggctattcagctggagctggaccctgaggaggat
gcccctgtgctggactggttctatgaccaccagcccctaagggacagcaggaagtatgtg
aatggctctacttatcagcgttggcagttcacattgcccatgatgtctactctctaccgc
ctggccaaccagctcttaactgaccttgtggatgacaactacttctacctatttgacctg
aaggcctttttcacctccaaggccctcaacatggccatcccaggaggccctaaatttgaa
ccactagtccgagacatcaaccttcaggatgaagactggaatgaatttaacgacattaac
aagatcatcatccgacagcctatcagaactgagtataagattgcttttccatacttgtac
aacaaccttccacaccacgtccacctcacttggtaccacactcccaatgtcgtgttcatc
aaaacagaggaccctgacctcccagccttctactttgatcctttgatcaaccctatctcc
cacagacattctgtcaagagtcaagaacctttgccagatgatgatgaggaatttgagcta
cccgagtttgtggaacctttcctgaaggacacacccctgtacacagacaacacagccaat
ggcatagctcttctgtgggcccccaggcccttcaaccttcgctccggtcgtacccgccgt
gccctggacatacctctggttaaaaactggtatcgggagcattgtcctgctgggcagcct
gtgaaggtgagggtctcctatcagaaactactcaaatactatgtgctgaatgctctcaag
caccgaccccccaaggcccaaaagaagaggtatctcttcaggtcatttaaggccaccaag
ttcttccagtccaccaaactggactgggtggaggtggggcttcaggtttgtcgccagggc
tacaacatgctcaacctcctcatccatcgaaagaacctcaactacttacaccttgactat
aatttcaacctcaagcctgtcaagacccttaccactaaggaacggaagaaatctcgtttt
ggaaacgccttccacttgtgtcgggaggtgcttcggctgaccaagcttgtggtggacagc
cacgtacagtaccgcctgggcaatgtggatgccttccagctagcagatgggctgcagtat
atatttgcccatgtgggccaactgacaggaatgtaccgctataaatataaactgatgcgg
cagatccggatgtgcaaggacctgaaacacctgatctactatcgcttcaacacgggtcct
gtagggaagggtccaggctgtggtttctgggctgctggttggcgagtctggttgtttttt
atgcggggtatcactcctcttttggaacggtggctgggcaacctcctggcccggcagttc
gaaggccgacactcaaagggggtggcgaagactgtgactaagcagcgagtggaatctcac
tttgacttggagctccgggcagcagtgatgcatgacatcttggacatgatgcctgaaggc
atcaaacagaacaaggcccggacaatcttgcagcacctcagtgaggcctggcgctgttgg
aaggccaacattccctggaaggttcctggattgccaacacccattgagaacatgatcctg
cgctatgtgaaggctaaggctgattggtggaccaataccgcccattacaaccgagagcgg
atccgccggggagccactgtggacaagactgtgtgtaagaagaacttgggtcgtctcacg
cgtctctatctgaaggctgaacaggaacggcaacacaattacctgaaggatggtccctac
attacagcagaagaagctgtggctgtctataccactacagtgcactggctggagagccga
agattctcccccattcccttccccccactctcctacaaacatgacaccaaactactcatc
ctggctctggaacggctcaaggaagcctatagtgtcaaatcccgtttgaaccagtcccag
agagaggagctgggcctgatcgagcaggcctatgacaacccccatgaggcgctatctcgc
atcaagcgtcacttacttacacagagagccttcaaggaggtaggcattgagtttatggac
ctatacagtcacttggtacctgtttatgatgtggaacctctagaaaagatcacagatgcc
tacttagaccagtacctgtggtatgaagctgacaaacgccggctcttcccaccctggatc
aaacctgctgacacagagccccctcctctgcttgtttataagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagacaagtgaaggagagtgcaatgtcatgctggagtcacga
tttgagaagatgtatgagaagattgacctgacgcttctgaacaggctcctgagacttatt
gtggaccacaacattgctgactacatgacggccaagaacaacgtggtcatcaactacaag
gacatgaaccatacaaattcttatggaatcatccggggactccagtttgcctccttcatt
gtgcagtactatgggctggtgatggaccttcttgtcttgggcctgcaccgggccagtgag
atggctgggcctcctcaaatgcccaatgactttcttagcttccaggatatagctacagag
gcagcccaccccattcgcctcttctgtcgctacattgaccgcatccacattttcttcagg
tttaccgcagatgaggcccgggacttgatccagcgctacctaactgagcaccctgacccc
aacaatgagaacatcgtgggctacaacaataagaagtgctggcctcgggacgcccggatg
cgcctcatgaagcatgatgtgaacctgggccgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgaccacggtgcagtgggagaacagctttgtgtcagtgtacagcaaa
gacaatcccaatctactcttcaatatgtgtggctttgagtgtcgcattctgccgaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctgcagaatgaggtc
actaaggagaggacagctcagtgcttcctgcgtgtggatgatgagtcaatgcagcgcttt
cacaatcgtgtgcgtcagatcctgatggcctctggttccaccaccttcaccaagattgtg
aataaatggaacacggcactcattgggctcatgacatacttccgtgaggctgtggtgaac
acccaggagctgctggacttgctggtgaagtgtgagaacaagatccagacccgaatcaag
atcggactcaactccaagatgccaagtcgcttccccccagttgtgttttatactcccaaa
gagcttggcggactgggcatgctgtccatgggtcatgttctcattccgcagtctgacctc
aggtggtcaaagcagacagatgtaggcatcacccacttccggtcagggatgagccatgaa
gaagaccagctgattcctaacttgtaccgctacatccagccttgggagagtgagttcatt
gactctcagcgggtctgggctgagtatgcactcaagagacaagaagccattgctcagaac
aggcggctgaccctggaggacctggaggattcatgggaccgaggcattccccggatcaat
actctgttccagaaggaccggcatactctggcttatgacaagggctggcgtgtccgcact
gactttaaacagtaccaggttctaaaacaaaatccattctggtggacacatcagcggcat
gatgggaagctctggaacctgaataattaccgcacagacatgattcaggccctgggtggt
gtagaaggcatcctggagcacacactcttcaagggcacttactttcctacttgggagggt
cttttctgggagaaggctagtggctttgaggagtcaatgaagtggaagaagctgaccaat
gcccagcggtctgggttgaaccagatccccaaccgtcgcttcaccctctggtggtcccca
actattaaccgagccaatgtatatgttggcttccaggtacagctggaccttactggcatc
ttcatgcatggcaagatccccacactaaagatctctctcatccagatattccgtgcccat
ttatggcagaagatccatgagagcattgtcatggatctgtgtcaggtatttgaccaggag
ttagatgcactggaaatcgagacagtacaaaaggagacgattcaccccaggaagtcctat
aagatgaactcctcctgtgcagacattttgctctttgcctcctataaatggaatgtctct
cggccctcactgctggctgactctaaggatgtaatggacagcactaccactcagaagtat
tggattgacatccagctgcgttggggtgactatgactcccacgacatcgaacgctatgct
cgggccaagttcctggactacaccacggacaacatgagtatctatccctcccccactggt
gtgctaattgccatcgacttagcgtacaatttgcacagtgcctatggaaactggtttcct
ggtagcaagcccctgatccagcaagctatggccaagatcatgaaggcaaaccctgccctg
tatgtccttcgagagcggatacgtaaaggcttgcagctgtactcttctgagcctactgag
ccctacctttcctcccagaactatggtgaactcttctctaatcagattatctggtttgtg
gatgacaccaatgtctatagagtcaccatccacaagacctttgaaggcaacttgactacc
aagcccatcaatggggccatcttcatcttcaatccaagaacagggcagcttttcctgaag
attatccacacatctgtgtgggctggacagaagcgtctgggtcagttggccaaatggaag
acagcagaagaagtagctgccctgatccgttctctacctgtagaggaacaacccaagcag
atcattgtgaccagaaagggcatgttggacccattggaggtgcacttgctagatttcccc
aacatcgtgatcaaaggctccgagctgcaattgcccttccaggcctgtctgaaagtggag
aaatttggagacttgatcctcaaggccaccgagccccagatggttctcttcaatctctat
gatgactggctcaggaccatatcatcctatacggccttttcccgactcattctgatcctt
cgtgccctccatgtgaacaatgaccgggccaaagtgatcctgaagccagacaagaccacc
atcacagagccacatcatatctggcccacactgaccgatgaggagtggatcaaggtggaa
gtgcagctcaaggacctgatcttggctgattatggcaagaagaacaatgtgaacgtggct
tccctaacacagtcagagatccgtgacatcatcctgggcatggagatctctgcaccttcc
cagcagcggcagcagatcgccgagattgaaaaacagaccaaggagcaatcccagctgact
gcgactcagacccgaactgtcaataagcacggagacgagatcatcacttccaccaccagc
aactatgagactcagaccttctcctccaagacagagtggagagtgagggccatctctgct
gccaacttacacctgcgcaccaaccacatctacgtctcatcggatgacatcaaagaaaca
ggctacacgtacatccttcccaagaatgtgctcaagaagttcatctgcatttctgatctg
agggcccagatcgcaggctacctttatggagtgagccccccagataaccctcaagtgaag
gagatccgatgcattgtgatggtacctcagtggggcacccaccagacagtgcacctgcca
ggccagcttccccagcatgagtacctcaaagagatggagccccttggctggatccacact
cagcccaatgagtccccccagctctcgccccaggatgtcaccacccatgccaaggtcatg
gctgacaacccctcatgggatggcgagaagaccatcatcatcacttgcagcttcaccccc
ggctcttgtaccctgactgcttacaagctgactcccagcggctatgagtggggccggcag
aacacggacaaaggcaacaaccccaaaggctacctgccctcccattatgagagggtgcag
atgctgctctccgatcgcttccttggcttcttcatggtgccggctcaggcgtcctggaac
tacaacttcatgggtgtgcgccatgaccccaacatgaagtatgagctgcagctggctaac
cccaaggagttctaccacgaagtgcaccggccgtcccacttccttaacttcgcactgctg
caggagggggaggtctactcggccgaccgcgaggatctctacgcctag
DBGET
integrated database retrieval system