KEGG   Monodelphis domestica (gray short-tailed opossum): 100017004
Entry
100017004         CDS       T01031                                 
Symbol
SETX
Name
(RefSeq) senataxin
  KO
K10706  senataxin [EC:5.6.2.-]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100017004 (SETX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdo03021]
    100017004 (SETX)
Transcription machinery [BR:mdo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100017004 (SETX)
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 AAA_22 SLFN-g3_helicase UvrD_C_2 Helicase_RecD DUF4164 STAT_alpha AAA_16 FapA
Other DBs
NCBI-GeneID: 100017004
NCBI-ProteinID: XP_007475254
Ensembl: ENSMODG00000012535
LinkDB
Position
1:complement(459237880..459326114)
AA seq 2783 aa
MSTCRWCTPGGESTVDFLKSYAFGTLPCEILTANEDLCYCLECVAEYHKARDKLPSLHEI
LWDFETSRLINHFEKSMKGEIEEDDELFIVDDNGETQLFGFTGQDFENKLRVPLLEILKY
PYLLLHEHVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK
VDRDDYYDLQEVLTCLFRVIELGLLESPDIYTSSEFEKGKLVLLPSHMYDTNNYKNYWLG
ICMLLTILEEQAMDSLLLGSEKQNDFMQSILHTMEKQSDEDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSTRTKLEPESDLEEMVTCSQIVYNYN
PEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVIHHLYSEVKDVLNQKVAVCDTVTEFFLLILVSVIELHRNKNCLHLLWV
SSQQWVEAVVKCAKLPTTAFARSAEKTAGSYSKGTNVISSLPLHQIPSNSVQLACVQLIR
SLLREGCQLGQQTLCKQFLDKLNLCLRGNLSLGWHLNSQETLELQTCLKQIIKNKKVKGL
PCSTFVDRTVACKTPPAIYIKEENDVPVERSKRDTSSQDSSSPSFSKEPLRADVYRTQES
PSLRRSYSWEEENRQTYLKESKLDDLFSNKSCLKQEKAPDAKSSHNHEILDNAEKEKDTS
ENNSPNTHLDLASRNNSMEGGYDRTTNIQTCLTVTDSRSDSPQNVSSSSDDSRSKNDSGF
KNSKFRTKAQKDELCAKLLQVMKEHKKTTMVSSVNNLESKQSSSILGSHNPCKDVEIQKG
FALIQNAQSEPCTTSEDTINEEESRNDNSLLIRKKSDARQLDPLTFHKNNYLSQESDSDD
DDDDDDTDNDDDTDDDDDDTDDDMVSLKTIRNTLLKKKCQLINQPDRHESKDSNYEEDNG
TDHVPCNLAREEVPPQNFKFSTLTDSQVDKDLDRLPFIAHISVLNFPSDSTPGSSYQLQK
KDKDVLRYSPVSQSNEPTSVVESTRNQVIIISDSDDDERSPNLQKQMKKDKIDIKREFPE
EYPSTSNTILENKLEKEEKTKSPLLVEESDSQFFEFETPHEVFSVWQDSETESKHSLQES
EPEQDSFLTSTGESGLDDQTNDWGYDTDYISDEVIQKVAKTLEEHLDSQCHVFPNEKFQT
ESKTKKQPYNAPMAEDLSSCLRNAEKPIICISGDLTEEHIENVDEEKKESTSTLSASPNL
NFEISSEESSKQNSPQSLSSPKLTKKMPLSKNSKKININPPRRQNKKNNQTSPKKILCRT
MPAVIPPKKFRQCPEPTSTAEKLGLKKGPRKAFDLSQRSLDFVVKLRDHGKTAGEVDTQQ
KKKTTKLITPQTLVVKNNKKMLACQDLQFLRQIRPKSHKNQQALSATHSKESSPKTVTKP
AQNSEAIIQASSGPSDNFKEKNKQASGTDTKQSRKSSFSGTETVKAKSLTQVPNDSPHST
KPGCTELNVRVETTEASISTSKNHSSNSSSVGGDLTGVVQPLPCLHSEGISFREDESDVN
SDTEENNLFLTQHDPVDMELSSQVESFNDFEVSIGKDTVEMEEGPKNFTADRALSNIKCK
HKDCTNTVENQGEYCSLHSEAKVSDDHVFVKPALPLSLSNKAIKSTTKIFSSSSNSRNAH
LSRAIENSLKLLPASKNQTNLTATTTPKLMQPVFPLVQKPILKDEGKNLSNILQPQNMQT
SPNYFKRPAPLSLLETKRTFQASSATNFPIRQSIFDSFIKEILKWKYEMFVNFDQFGPPA
NLCQAILKPVPVTFQNSEDYLNVFFPLLILNTFETVAQEWIDNPKKGNTYELHLRSFSAG
DINCGQFVVCLQECDMAKQLHPKENDLVFLIPKKLNGKKKVIEESEMKDQQVYHCGYVSQ
FRRSSVRLHGVMERALDLESEDLGHNAQFEGCLSIQTQSNLSFHINESIDCIVISSLVTT
QRKLKALSLLGRNTVVPLARAILNPSTSDFCPRDSLNTAPERILTYLKDYNEDQKKAIEV
AYAMVKQPPLIAKICLIHGPPGTGKSKTIVGLLYRILTEKPKRGDSDENLNAKIKRNRVL
VCAPSNAAVDELMKKIILEFKEKCQDKKNPLGNCGDINLVRLGPEKSINNEVLKFSLDSQ
VNHRMKKDLPSHIQEMHERKEHLDVKLDKLSRQRALDRCEKGQKRSNLDEEIARISKERQ
QLASKLKEVRGRPQETQSSIILESHIICCTLSTSGGLLLESAFRRQGCVPFSCVIVDEAG
QSCEIETLTPFIHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMARLYKHLEEQVKQN
VISRSPVLQLTVQYRMHPDICLFPSSYIYNRTLKTNRLTEESRCTSDWPFQPYLVFDVGD
GSERRENDSYVNVQEIKLVMELIKLIKDRRKDITMRNIGIITHYKAQKMMIQQELDKEFE
RNRPGEVDTVDAFQGRQKDCVIVTCVRANASQGSIGFLASLQRLNVTITRAKYSLFILGH
LRTLMENQHWNHLIQDAQKRGAIIRTFDKNYKYDAMKILKLKSMPQRSLSHPSMVVPEIT
RSQNSLPSIKPKEVMNKLDSVISKTAAVASPRRSSTSLLHADIQPFDCREATVVTKATEV
PIVRDPRLAKRNDRDAAEKFLGETQPFSIQHPRVSAPICEPGLPLTHQDPSSILQHLFSK
VAASNNCNLTVQLEAPSASTSVPTNKRKTSEEEGSGYGREVTSSREGQEKSGYRKDYHPD
RDYCLDRRRKENQDSHSKRRKLS
NT seq 8352 nt   +upstreamnt  +downstreamnt
atgagcacatgtcgctggtgtacaccaggtggtgaatccactgttgacttcctaaagagc
tatgcttttgggactcttccctgtgaaattctcacagctaatgaggacctctgttactgc
ttggagtgtgtggctgaataccacaaagcaagagataaactaccttctttgcatgagatt
ttatgggattttgaaacctctcgtctcataaatcattttgaaaaatccatgaaaggagaa
attgaagaagatgatgaactatttatagtcgatgacaatggtgaaacacaactgtttggt
ttcactggccaagactttgaaaacaagcttcgagttcctcttcttgaaatactgaaatac
ccttatctgctcttacatgagcatgtcaatgaattatgtgttgaagcactttgtaggatg
gagcaagctaattgctcctttcaggtatttgacaaacatccagggatttatttgttcttg
gtacatcccaatgaaatggttcgacgatgggctattctaacagccagaaacttggggaag
gtagacagagatgattactatgatttacaggaagtattgacttgcttatttagagttatt
gaattggggcttttagaaagtccagatatttatacttcttcagaatttgagaagggtaaa
cttgtccttttgccatctcatatgtatgatacaaacaactacaaaaactactggttagga
atctgtatgttgctaactattcttgaggagcaagccatggattctttgttgctgggctca
gaaaagcaaaatgattttatgcaatcaatacttcatactatggagaaacaatcagatgag
gacagtgtagatcctttctggccagcattgcactgcttcatggtgattctggatcgtctg
ggctcaaaagtctggggtcaacttattgatcccattgaagcattccagaccattattaat
aatgtgagctacaataaggaaattcaaaatatacgcaacagttccacaaggaccaagtta
gaacctgaatcagatttggaggaaatggtgacttgcagccagattgtgtacaattataat
cccgaaaaaaccaaaaaggattcaggatggagatcagctatttgccctgattactgccct
aacatgtatgaagagatggaaacattagccagtgtacttcagtctgacattggacaagac
atgcgtgttcataacagcacgtttctttggtttatcccttttgttcagtccctcatggac
ctcaaggatttgggtgtagcttacatagtggaggttattcatcatctatattcagaagtc
aaagatgtcctcaaccaaaaagtagcagtgtgtgacacagtcactgagtttttccttctg
atactagtgtcagtaattgaactgcatagaaataaaaactgtttgcatttgctgtgggtt
agttctcagcagtgggtagaagctgtagtgaaatgtgctaaacttcctaccacagcattt
gcacggagtgcagaaaagacagctggaagctactccaaaggaacaaatgtaatatcttct
ttgcctttgcatcaaattccatctaattctgtacagcttgcttgtgtgcagctaattcga
agtcttcttagagaaggatgccagcttggacagcaaactctttgtaaacagttcttagac
aagctcaacttgtgtctgaggggaaatttgtcccttggttggcatttaaatagtcaggag
acccttgaattacaaacatgtttgaaacaaatcattaaaaacaaaaaggtcaaaggattg
ccatgtagcacttttgtggataggactgtagcatgtaaaactccccctgcaatttatatt
aaggaagaaaatgatgtacctgtggagagatcaaaaagggatacaagttctcaggacagt
tctagtccatcattttctaaggaacctttgagagctgatgtctatcgaacacaagagagt
ccatctctaagaagaagttatagttgggaggaggaaaatagacaaacatacttgaaagag
tcaaaattagatgaccttttttcaaataaatcatgcttaaagcaagaaaaagcccctgat
gctaaaagttctcataatcatgaaattttggataatgcagaaaaagagaaagatacttca
gagaacaactctccaaatacacacctggatttggcttcaagaaataattcaatggaaggg
ggatatgacagaacaacaaatattcagacatgtttaacagtgactgactctagatctgat
tctccccaaaatgtatcaagctcaagtgatgattctcgttccaaaaatgattctggcttt
aagaactcaaagtttaggactaaagcacagaaggatgaattatgtgcaaaactattacag
gtaatgaaggaacacaaaaaaacgaccatggtttccagtgttaataatttagaatcaaaa
cagagttcatccattttggggagtcataatccatgcaaagatgtggagattcagaaaggg
tttgccttaatacaaaatgcacagtcagagccttgtactacttcagaggatacaataaat
gaagaagaatcaagaaatgataattcattgcttataaggaaaaaatcagatgctaggcag
ctagatcctttaacatttcataaaaacaattatctatcacaggaaagtgatagtgatgat
gatgatgatgatgatgatactgataatgatgatgatactgatgatgatgatgatgatact
gatgatgatatggtttcacttaaaacaattagaaataccttactgaaaaagaaatgtcag
cttataaatcagccagacaggcatgaatcaaaggacagtaactatgaggaagataatggt
actgatcatgttccatgtaatttggcaagagaggaagtgcctcctcagaattttaaattt
agcaccttaacagattctcaagtagataaagacctggatagattgcctttcattgcccat
attagtgttcttaatttcccttcagattcaactccaggaagttcttaccagctacagaaa
aaagacaaagatgttttaagatattctccagttagccaaagtaatgaaccaacctctgtt
gtagaaagcactagaaatcaagttataatcatttctgattcagatgatgatgaaaggtca
ccaaatcttcagaaacaaatgaaaaaagataaaatagacattaaaagagaatttccagaa
gagtacccttcaacttcaaataccattttggaaaacaaactagaaaaagaagaaaaaaca
aaatctcctttgctggttgaggaatctgattcacagttttttgagtttgaaactccacat
gaagtattttctgtttggcaagattctgaaacagagagcaaacattctcttcaggaaagt
gaaccagaacaagactcctttttgacttcaacaggtgagagtggattagatgatcagaca
aatgactggggttatgatacagattatatatctgatgaagttattcagaaggtagcaaaa
actcttgaagaacatttagactcacagtgtcatgtttttcctaatgagaaatttcaaact
gaatcaaaaactaagaaacaaccatataatgcacctatggctgaagatctttcatcttgt
ttaagaaatgcagaaaaacctattatttgtatttctggggatcttactgaagagcacatt
gaaaatgtagatgaggagaagaaagaatctacatctactctttcagcatcacctaattta
aattttgaaatttcctctgaagaatcaagcaaacagaattctcctcaatctctttccagt
ccaaaactcaccaaaaaaatgccactttctaaaaattcaaaaaaaatcaacattaacccc
ccaaggaggcagaacaaaaaaaataatcaaactagtcctaaaaagatactttgtagaaca
atgcctgctgtgattcctccaaagaaatttcgccagtgtcctgaaccaacctcaactgct
gaaaaacttggtctgaagaaggggcctcggaaagcatttgacttatctcagcgatcttta
gattttgtggtaaagttacgtgatcatggaaaaactgcaggtgaagttgatactcagcag
aagaagaagacgacaaaattaattactccacagactctggttgtcaaaaataacaagaaa
atgttggcatgtcaagatcttcagtttttgagacagataagacccaagtcacacaaaaat
caacaagcactttctgccactcatagtaaagagtcttctccaaagacagttacaaaacca
gcccagaattctgaagctattattcaagcatcttctggacccagtgacaattttaaggaa
aaaaataaacaggcctcaggcactgatacaaagcagtcaagaaaaagctcattttctggg
acagaaacagtcaaagcaaaaagtctaacacaggttcctaatgatagtcctcattctacc
aaacctggttgtacagaattaaatgtaagagtggaaacaactgaagccagtatctctact
tcaaagaatcattcatccaactcatcttctgttggaggcgatttaacaggggtcgtccaa
ccattaccttgtttacattctgaggggatatcttttagagaagatgagtctgatgttaac
agtgatacagaggaaaataatttgtttttaacacaacatgatcctgtagatatggaatta
agttcacaagtagagagttttaatgactttgaagtttctattggaaaagatacagtagaa
atggaggaaggtcctaaaaacttcactgcagacagagctttgagtaatataaaatgtaag
cacaaagattgcactaacactgtggaaaatcagggtgaatattgctctctacattctgaa
gctaaagtatctgatgaccatgtttttgttaaaccagccttgccactttcactgtctaac
aaagctataaagtctactaccaaaatttttagttcaagtagtaattctcgaaatgctcat
ctttctagagctattgaaaatagtttaaaactcctgccagcatcaaagaatcaaacaaat
ttgacagccacaacaacgccaaaactaatgcaaccagtctttccattagttcaaaaacca
atattgaaggatgaggggaaaaatttatccaatattcttcaaccacagaatatgcagact
tctccaaattacttcaaaaggcctgctccactgagcctccttgagacaaaaagaactttt
caagcttcctctgctacaaattttcctatacgacaatctatatttgacagttttattaag
gagatcttaaaatggaaatatgaaatgtttgtgaactttgatcagtttgggcctccagca
aatctttgccaggccatcttaaaacctgttcctgtaacatttcaaaattctgaagactat
ttaaatgtttttttccctttgctgatcctgaatacttttgaaacagtggctcaagaatgg
attgacaacccaaagaaagggaacacctatgagcttcatttacgaagcttttctgctggt
gacataaattgtgggcagtttgtggtttgccttcaggagtgtgatatggctaaacaactg
catccaaaggaaaatgatttggtatttttgattcctaaaaaattaaatggaaaaaagaaa
gttattgaagaaagtgagatgaaggatcagcaagtgtatcattgtggttatgtgtctcag
tttcgacgctcttcagtcaggctccatggtgtaatggaaagagcactggatttggagtca
gaagacctaggacataatgcacaatttgagggttgcctttccatccagactcaaagcaat
ttgtcattccacataaatgaatcaatagactgtattgtgatcagttctttggtgactaca
caacggaaattgaaagccttgtcccttttggggcggaatacagtggttccactggccagg
gcaattctgaacccaagtacttcagacttttgtcctcgagattcactgaacacggctcct
gagaggattcttacctacctgaaagactataatgaagatcaaaaaaaagcaattgaagtt
gcatatgctatggtaaagcaacctcccctaattgccaaaatctgcctgattcatggacct
cctggaactggcaagtcaaaaactattgttggcctcctataccgaattctgacagagaaa
ccaaagaggggagattcagatgaaaacttgaatgccaaaatcaaacgaaaccgtgttctt
gtatgtgcaccctctaatgcagctgttgatgaacttatgaaaaaaatcattcttgaattt
aaagaaaaatgccaagacaagaagaatcctttgggaaattgtggagatataaatttagta
cggctgggcccagaaaaatctattaataatgaagtcctaaaattcagtttggatagtcaa
gttaaccacagaatgaaaaaggacttgcccagtcatattcaggagatgcatgagagaaag
gaacatttggatgttaaattagacaagctttctcgccaacgagctttggatcgatgtgaa
aaagggcagaagagatcaaatttagatgaagaaattgcacgaatttctaaagagaggcag
cagcttgcttctaaacttaaagaggttcgaggacgcccacaggaaactcagagtagcatt
attctggagtcacatatcatctgctgtacattgagcacaagtggtggtttgctgctagag
tctgcttttcgtaggcaaggatgtgtccccttcagttgtgtcattgttgatgaggctggg
caatcttgtgagattgagactcttactccatttatccatcgttgcaacaaacttattctg
gttggagatcctaaacagctccctcccactgtcatttctgtgaaagcacaggaatatggc
tatgaccagtcaatgatggctcgattatacaaacacctagaagaacaggtgaaacagaat
gtgatcagtagatcacctgttttgcagctgacagttcaatacaggatgcatcctgatata
tgtctcttcccatctagttatatttataacagaactttgaaaacaaacaggttgactgaa
gagagtcgatgtacatcagactggccatttcagccttaccttgtgtttgatgtgggagat
ggttcagaaagacgggaaaatgattcatatgttaatgtccaagaaataaaactagtaatg
gaattaattaaactgatcaaagacagaagaaaggatattactatgcgtaacattggcata
atcacacattacaaagcacaaaagatgatgattcaacaggaattggacaaagaatttgaa
agaaacagaccaggggaagtcgacactgtggatgcattccagggtcgccaaaaggattgc
gttattgttacatgtgtcagagcaaatgcttcacaaggctcaattgggtttctggcaagt
ttgcaaagattgaatgtaaccattactcgagccaagtatagtctgtttatccttggacac
ttgaggactttaatggaaaaccaacattggaatcacctgattcaagatgctcagaagcga
ggtgccattattaggacttttgacaagaattataagtatgatgcaatgaaaattttgaaa
ctcaaatccatgccacagcgaagcctatcacatccttccatggtagtgccagaaattact
agatcccagaatagcttgcccagcattaagccaaaagaagtgatgaacaaactggacagt
gttatttctaagaccgccgctgttgcttctccacggcgtagcagcacttccttgttacat
gctgacattcagccctttgactgcagagaagctacagttgttacaaaagctactgaggtg
cctattgtccgggacccaagactagccaaaagaaatgaccgtgatgctgcagagaaattt
ctgggagagacacaaccattcagtatccagcatccaagagtatcagcacccatatgtgaa
cctggccttcctttaactcaccaggaccccagcagtatcttacagcaccttttttcaaaa
gtagcagcctccaacaattgcaatctgactgtacaacttgaagctccctctgcaagtacc
tctgtgcccacaaacaaaagaaaaaccagtgaagaggaaggatctggctatggaagagaa
gtaacgtcttctagagaaggacaagaaaagtctgggtataggaaggactatcacccagat
agggactattgcttggacaggaggagaaaagaaaaccaagacagtcattcaaaaagaaga
aaactttcatag

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