Monodelphis domestica (gray short-tailed opossum): 100020074
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Entry
100020074 CDS
T01031
Symbol
ITGB5
Name
(RefSeq) integrin subunit beta 5
KO
K06588
integrin beta 5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04145
Phagosome
mdo04148
Efferocytosis
mdo04151
PI3K-Akt signaling pathway
mdo04510
Focal adhesion
mdo04512
ECM-receptor interaction
mdo04810
Regulation of actin cytoskeleton
mdo05165
Human papillomavirus infection
mdo05205
Proteoglycans in cancer
mdo05410
Hypertrophic cardiomyopathy
mdo05412
Arrhythmogenic right ventricular cardiomyopathy
mdo05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100020074 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100020074 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100020074 (ITGB5)
04148 Efferocytosis
100020074 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100020074 (ITGB5)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100020074 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100020074 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100020074 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100020074 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
100020074 (ITGB5)
05414 Dilated cardiomyopathy
100020074 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100020074 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mdo04515
]
100020074 (ITGB5)
Membrane trafficking [BR:
mdo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100020074 (ITGB5)
Cell adhesion molecules [BR:
mdo04515
]
Integrins
Integrin beta subunits
100020074 (ITGB5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
DUF2975
Motif
Other DBs
NCBI-GeneID:
100020074
NCBI-ProteinID:
XP_007493880
Ensembl:
ENSMODG00000018360
UniProt:
F6PPW0
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All DBs
Position
4:complement(90574126..90769152)
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AA seq
800 aa
AA seq
DB search
MFRRLWSLSSCFLVFCTLLPQSPGLNICTSGSATSCEECLLINPKCAWCSKEDFGNQRSV
TSRCDLKANLLKLGCGGELESPDSSITVLKNLPLSIKGSSPSNADVIQMTPQKISMNLRP
GDKTPFRVQVRQVEDYPVDLYYLMDLSLSMKDDLDTILNLGTKLAEEMRKLTSNFRLGFG
SFVDKNISPFSYTAPRYQTNPCIGYKLFPYCVPSFGFRHLLSLTDKVDSFNEEVKKQMVS
RNKDAPEGGFDAILQAAVCKEKIGWRKEALHLLVFTSDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASKQMDYPSLALLGEKLAENNIHLIFAVTKNHYMLYKNFTALIPGTTVEIL
HADSRNIIQLIVNAYNSIRSKVELSVWDNPEDLGLSFTATCQDGLSYPGQRKCGDLKIGE
TVSFEVSVEARSCPSPDTVHTFTLRPVGFRDALELVVTYNCSCNCASRTEQDSPRCSGNG
TYTCGTCECHPSYLGSKCECQEGENRDLYQNLCREAEGKPLCSGRGECSCNQCSCYESEF
GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETETCLSNDGQ
ICSGRGYCSCGRCQCIKPGAFGETCEKCPTCPDACSTKRDCVECMLFNSGRLADNQTCQK
HCRDEVIIQVDSIMKDDQEAVLCFYKTAKDCVMMFTYSELPSGKSKLMVLKEPECGSAPS
AMTILLAVVGSILLVGIALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIS
THTVDFTFNKLNKSYNGTVD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaaggctgtggtctctttcctcctgcttcctagtgttctgcaccctcctgccc
cagagcccaggtctcaacatctgtacaagtgggagtgccacctcctgtgaagagtgtctg
ctcatcaacccaaaatgtgcttggtgttccaaggaggattttggtaatcagaggtcagtc
acttcccggtgtgatctgaaggcaaatctcctcaaacttggttgtggaggggaactggag
agcccagatagcagcatcactgtcctgaaaaaccttcctctgagcatcaagggctccagc
ccttccaatgcagatgtcattcagatgacgccccagaagatctccatgaatcttcggcct
ggtgacaagactcccttccgagtccaagtgcgacaggtggaggattaccctgtggacctc
tactatttgatggacctctccctgtccatgaaggatgatttagacaccattctcaatctg
ggcaccaagctggctgaggagatgaggaagctcaccagcaatttccgtttgggttttggc
tctttcgtagacaaaaacatctcccccttttcctacactgcaccgagataccaaaccaat
ccatgcattggttacaagttgtttccatactgcgtcccatcctttggcttccgccatctg
ctgtctttaacggataaagtcgatagcttcaatgaagaagttaaaaaacagatggtgtcc
agaaacaaagatgctcccgaagggggctttgatgccatcctccaggcagctgtatgcaag
gagaagattggttggcggaaggaagctctgcacttgttggtgttcacgtcagatgatgtg
ccgcacattgccctggatggcaaactgggaggcctggtgcagccacatgatgggcaatgc
catctgaatgaggccaatgaatatactgcgtccaagcagatggactatccatcacttgcc
cttcttggagagaaattggcagaaaacaacatccacctgatatttgcagtgacaaagaac
cactacatgctctacaagaattttacagcattaatacctggaactactgtggagattcta
catgctgactccagaaatatcatccagttgatcgttaatgcgtacaatagtatcagatcc
aaagtagagctgtctgtctgggacaatcctgaagatctcgggctctccttcacagccacc
tgccaagatggtctgtcctatccaggccagaggaaatgtggagacctaaaaattggtgaa
acagtatcttttgaggtgtccgtggaagcccgcagttgcccttccccagacaccgtgcac
acgttcacgctgagacccgttggattccgggatgccctggagctcgtggtaacctacaac
tgctcgtgcaactgcgccagcaggactgagcaagacagccccaggtgcagcgggaacggg
acttacacctgtggcacctgcgagtgccaccccagctatctgggctccaagtgcgagtgt
caggagggcgagaaccgggacctctaccagaatctgtgccgcgaggccgagggcaagcct
ctgtgcagcggccggggcgaatgcagctgcaaccagtgctcctgctacgagagcgaattc
gggaagatctacgggcccttctgcgagtgcgacaacttttcctgcgccaggaataagggg
gtcctctgttcaggtcacggggaatgccactgtggggagtgcaaatgccacgctggctac
atcggggacaactgtaactgctcaacagagaccgagacatgcctctccaatgacggtcag
atctgcagcggacgagggtattgctcgtgtgggcgatgccagtgcataaagcctggggcc
tttggagagacctgtgagaagtgcccaacctgtccagacgcctgcagcacaaagagagat
tgtgtcgagtgtatgttatttaactcagggagactggctgacaaccagacatgccaaaaa
cattgcagagatgaagtcatcattcaggtggattcgatcatgaaagatgaccaggaagcc
gtcctgtgtttctacaaaactgccaaggactgtgtcatgatgttcacttactctgagctg
cccagtggcaagtccaagcttatggtcctcaaggagccagagtgtgggtctgcacccagt
gctatgacaatcctgttggccgtggtgggtagcattcttcttgttggcattgccctcctt
gccatctggaagctgcttgtcaccatacatgaccgaagagagtttgcaaagttccagagt
gaacgttccagggcacgctatgaaatggcgtccaaccctctctacagaaagccaatatct
acccacactgtggatttcacctttaacaaactcaacaaatcctacaatggcaccgtggac
tga
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