KEGG   Monodelphis domestica (opossum): 100021775Help
Entry
100021775         CDS       T01031                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  
DNA ligase 3 [EC:6.5.1.1]
Organism
mdo  Monodelphis domestica (opossum)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mdo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    100021775 (LIG3)
Enzymes [BR:mdo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100021775 (LIG3)
DNA repair and recombination proteins [BR:mdo03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100021775 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
LinkDB All DBs
Position
2
AA seq 1005 aa AA seqDB search
MTLSLTVLFQQACRVLGQRKVSHLLREPFHWQLSNWLFSVSGAGHCHGSWLLVKKRPSLW
FKGSSPRPSTARFTFLPVSHVGFCTGASEMAEQRYCVDYAKRGTAGCKKCKEKIVKGTCR
IGKVMPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELQDAEKDQIN
EHIAALSSKAASTPTKRATVQAKLTTTGQVISPHKGSSSVINTNPRKFSGYTAKPSTSKG
PVSYLTPKPTLSARKCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIHDFLQKGSGGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQDDMIRDLEQGDVSETVRVFF
EQSRSFPPATKSLLTIQEVDAFLLQLSKLTKEDDQQNVLQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLANQQESEKVPGMKRTLNVQASLM
TPVQPMLAEACKSIDYAMKKCPNGMFSEIKYDGERVQVHKNGDQFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGHSMILDAEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVQIPNRILFSEMKHVTKASHLANMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDP
SSKKWCTVTKCSGGHDDATLARLQNELDMVKISKDPSKIPSWLKINKNYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYHLSKEKADF
MVVATDEGSSVTSGSSGENEGTSASSTPQRASKASPSQASAQARKAEIKRNGSPGPADYK
PSGRPSPGKASEKQGEKRKAPEEDSSQKTLLDIFTGVRLYLPPSTQDFGRLRRYFVAFDG
DLVQEFDAASATHVMGGGGENPEALRVSPEWIWACIRKRRLVAPC
NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt
atgactttgtctttgactgtcctcttccagcaagcttgcagagttcttggccaaaggaaa
gtatcacatttgctccgagagccattccattggcagctaagtaactggctcttcagtgtg
tcaggagcaggtcactgtcatggctcctggctccttgtgaagaagaggccttctctctgg
ttcaaggggagcagcccaagaccatctactgctcgatttaccttcctgccagtgtcacat
gtggggttctgcacaggtgcttctgagatggctgaacaacggtattgtgtggactacgcc
aagcgtggtacagctggctgcaagaaatgcaaggagaagattgtgaagggtacgtgccga
ataggcaaagtgatgcccaaccccttctcagaatctgggggtgacatgaaggaatggtac
catatcaagtgcatgttcgagaagctggaaagggcccgggctaccaccaagaagattgaa
gacctgactgaacttgagggctgggaagagctccaggatgcagagaaggatcagatcaat
gagcacattgcagcactctcctcaaaggcagcaagcacaccaacaaagagagccacagtc
caggccaagctgacaaccactggccaggtgatttctccacacaaaggatcctcctcagtc
attaataccaatccccggaaattctctggttacacagctaagccaagcacctctaaggga
cctgtctcatacctcacccccaagcccactctgtcagctagaaagtgtgacccaaagcac
aaagactgcttgttgagggagtttcggaaactgtgtgccatggtggctgacaaacccagc
tacaatgtgaagacccagatcatccatgacttcctgcagaaaggatcaggcggtgatggt
ttccatggtgatgtgtacctgacagtgaagctactcctgccaggtgtcattaaaagtgtt
tacaacctgaatgacaaacagattgtgaagcttttcagtcggatttttaactgcagtcag
gatgacatgatccgggacttagagcagggagatgtgtcagagactgtgcgcgtgttcttc
gagcagagcaggtcctttcccccagcaaccaagagcctcctcaccatacaagaagtagat
gcattccttcttcagttgtccaaactcacaaaagaggatgaccagcaaaatgtgctacag
gacattgcctccaggtgtactgccaatgacctcaagtgtatcatcaggctcatcaagcat
gatctcaagatgaattcgggggctaagcatgtgctggatgccctggatcctaatgcttat
gaagctttcaaggcctcaaggaacctccaggacgtggtagagcgtgtcctagcaaaccag
caagaatcggagaaggtgccaggcatgaagcggacactcaacgtccaggcatctcttatg
acccctgtgcagcccatgctggctgaagcctgcaaatccattgactatgcaatgaagaag
tgtcctaatgggatgttctctgagatcaagtatgatggtgagcgggtacaggtacacaag
aatggggaccagttcagctactttagccgcagcctcaagccagtcctgcctcacaaagtg
gcccattttaaggactacatcccacaagctttcccaggtggccacagcatgatcctagat
gctgaggttcttctgatcgacaccaaaacaggcaaacctctgccctttgggactctgggt
gtgcataagaaagctgctttccaggatgccaacgtttgcttatttgtgtttgactgcatc
tacttcaatgatgtcagcctgatggacagaccattgtgtgaacgacggaagtttctccat
gataacatggttcagatccccaatcggatcctgttctctgaaatgaagcacgtaacaaaa
gcttcacatttagccaatatgatcaaccgtgtcatccgggaagggctagaaggactggtg
ctaaaagatgtgaagggaacctatgagccagggaagcggcactggctgaaagtgaagaag
gattacttgaatgagggggccatggcagacacagcagatctggtggtccttggggccttc
tatggacaaggaaataaaggtggcatgatgtctatcttcctaatgggatgctatgaccct
agcagcaagaagtggtgcacagttaccaagtgttctggaggccacgatgatgccacactt
gcccgcctgcagaacgaactggatatggtgaagatcagcaaggatcccagtaagattccc
agctggctgaaaatcaataagaactactaccccgacttcatcgttccggatccaaagaaa
gctcctgtttgggagatcacaggagctgaattctccaaagctgaggcccatacagccgat
ggcatctcaatccgtttcccccgctgtacacgaattcgtgatgataaagattggaaatca
gccaccaacctcccacagcttaaggagctgtaccatctttctaaggaaaaagctgacttc
atggtggtggctacagatgagggtagttctgtgactagtggcagcagtggagagaatgag
ggcacctcagcatcttctacccctcaaagagcctccaaagcttctcccagtcaggcctct
gcccaggccagaaaggcagaaataaagaggaatggctccccgggccctgcagactacaaa
ccatctgggagaccttcccctgggaaagcgagcgagaagcagggggagaaaaggaaggcc
cccgaggaagactccagccaaaagacgctgctggacatcttcacgggcgtgcggctctat
ctgccgccctccacgcaggacttcggcaggctccgccgctacttcgtggcgtttgacggg
gatctggtccaggagtttgacgcggcctcggctacgcacgtgatgggtggtggcggcgag
aaccccgaggccctgcgggtttcccccgaatggatctgggcgtgtatccgcaaaaggagg
ctggtggcgccatgctag

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