KEGG   Methanobrevibacter sp. AbM4: Abm4_1378
Entry
Abm4_1378         CDS       T02687                                 
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
Organism
meb  Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:meb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meb03400]
    Abm4_1378
Enzymes [BR:meb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Abm4_1378
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Abm4_1378
DNA repair and recombination proteins [BR:meb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Abm4_1378
SSDB
Motif
Pfam: DEAD_assoc DEAD Lhr_WH Helicase_C ResIII SNF2-rel_dom nSTAND3 PhoH T2SSE AAA_19
Other DBs
NCBI-GeneID: 15798868
NCBI-ProteinID: AGN17255
UniProt: R9SLD2
LinkDB
Position
1614820..1617423
AA seq 867 aa
MIKKQNKEYSKEEIYEILHPWVREWFDKNFDDFTPAQKRAIPEIHKKNNVLISSPTGSGK
TLTAFLSIISELTTLADKGELEDKVYCIYISPLKALDNDIEKNLDEPLREIERISKKELG
IRKAIRTGDTTQYQRQKMLKKPPHILITTPETLAILLVAPKFREKLSHVRYVIIDEIHSL
ANNKRGTHLSLSLERLNALVGGFVRIGLSATVAPLKEIGRFLVGCEYGVERNCKLIDINY
LKELDLEVMSPVSDIVIADNEDTRVGMYVIVDDLIQEHETTLIFTNTRSGTESFVYNLKK
MFPDHYNNNNIMAHHSSLSKEIRLKTEEKLKDGKLKAVVSSTSLELGIDIGYIDLVILIN
SPKSVSRALQRIGRSGHRLHEKSKGRIIVTDRDDLVECSVLLKDAKEGRIDRINIPTNCL
DVLAQHIYGMAIENPWDIDYAYDIIRKSYCYKDLSRDDYEDVLSYLAGEYTPLEERYVYP
KIWIDYKENTFGKRGKLARVLYSTNIGTIPDRSGVLVKCDGEVVGRIEDYFLDRLKPGDT
FVLGGTTLKFKYSKGTVAYASPAGGPPTIPRWFSQQLPLSYDLALDIQKFRANMETKLQY
NKGKEDVLNYIHEYLYVDDFAANSIYEYFNEQFLYGEISSYKKLVIEYYKGFGGKRFVVF
HSLFGRKVNDALSRATAYIAARDYNTNVTISISDNGFYLSADKGTIGGLESFEKLNTENF
EKILIKSLDKTETLAHRFRDCAGRSLMTLRHYKGNNKSVGRQQVRGKILLKYVQEMDNNF
PILNEARREVTEDYMDMENALEVIKAVENKDMEIKTINTVIPSPFAFNLVSQGYLDVLNQ
NDKVEFTKRMHKAILKEIKEKLKNEYD
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgattaagaaacagaacaaggaatactccaaggaagagatttatgaaattcttcaccca
tgggttcgtgagtggtttgataaaaactttgacgactttactcccgctcaaaaacgtgcc
attcctgaaatccataagaagaataatgttcttatatcctcaccaactggttctggaaaa
actttaacagcattcttatcaattatatccgaactaactaccttagcagataaaggggaa
cttgaggataaagtgtactgtatctatatttccccccttaaggcattagacaacgatatt
gaaaagaacctagatgagccattaagggagattgaaaggatatccaaaaaggaattagga
attagaaaagcaataagaacaggagataccacccaatatcaaagacaaaaaatgcttaaa
aaaccgccacacattcttattacaacaccggaaaccttggccattttacttgtagcacct
aaattcagagagaaattatcccatgttagatatgtgataattgacgagatacattccctt
gcaaataacaaaagaggaacacatttaagtttatctcttgaaagattaaatgcccttgtt
ggaggatttgtaagaataggtttatctgcaacagtcgccccccttaaagaaataggaagg
tttcttgttggatgtgaatatggtgttgaaagaaactgtaaactaatagacataaactac
cttaaagaattagaccttgaggttatgagtcctgtaagtgatattgtcattgcggacaat
gaggatacccgtgtcgggatgtatgtaatagtggatgatttaattcaggaacatgaaaca
acactcatctttacaaacacaagaagcggtaccgagagttttgtatataaccttaagaaa
atgtttccagatcattataataacaataacataatggcccaccactcctcactttcaaaa
gaaatcagacttaaaacagaggaaaaactaaaggatggtaaattaaaagccgtggtatct
tcaacatccctagaacttggtattgatattggatacatcgatcttgtaatacttataaac
tcaccgaaatctgtatcccgtgcacttcaaagaattggaagaagcggtcatagactacat
gaaaaatccaaaggaagaataattgtaacagatagggatgatcttgtagagtgcagcgta
cttttaaaagatgcaaaagaaggtagaattgatagaatcaatatccccactaactgttta
gatgtcctggcacaacacatttatggaatggccattgaaaatccatgggatatagattat
gcatacgacattataagaaaaagttattgctataaggatttatcacgtgatgactatgaa
gatgtattaagctatcttgcaggagagtatacgccacttgaggaaagatatgtctatcca
aagatatggattgactataaggaaaacacatttggaaaacgtggaaaactagcacgtgtc
ttatattccacaaatattggaaccatacctgacaggtcaggcgtacttgtaaaatgtgat
ggtgaagttgttggaaggattgaggactatttccttgatagactaaaacctggagataca
tttgttttaggaggtacaaccctcaaattcaaatattcgaaaggaacagttgcatatgct
tcacctgcaggaggacctccaaccataccacgatggttttcccaacaattacccctatcc
tatgatctggcattagatattcagaaatttagagccaatatggaaactaaactccagtat
aacaagggaaaagaagatgttttaaattatatacatgaatatctatatgttgatgatttt
gcagcaaattctatctacgaatattttaatgaacaattcctatatggggagatttcctcc
tataaaaaattagtaattgaatattataaaggatttggaggaaaacgctttgtggttttc
cactccctctttggtagaaaagtaaatgatgcactttcacgtgcaacagcttatattgca
gcaagagactataatacaaatgtaacaatatcaatttcagataatggattttatttaagt
gccgataaaggcactattggtggtcttgaatcatttgagaaattgaatactgaaaatttt
gaaaaaattttaataaagtcccttgacaaaaccgaaacactggcacatagatttagagac
tgtgctggaagatcacttatgacactaagacattataagggaaataataaatcagttggt
cgccagcaagtaagggggaagatattacttaaatatgttcaggaaatggacaataacttc
ccaatattaaatgaggcgagaagagaagttacagaggattatatggatatggaaaatgct
ttagaagtaataaaggcagttgaaaacaaagacatggaaattaaaacaatcaacacagta
attcctagcccatttgcatttaatctagtttcacaaggttatttggatgtattaaatcaa
aatgacaaagtagaatttacaaaaagaatgcataaagctattttaaaggaaattaaagag
aaattaaaaaatgaatatgattaa

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