Methanosarcina sp. WH1: MSWH1_1187
Help
Entry
MSWH1_1187 CDS
T03851
Name
(GenBank) hypothetical protein
Organism
mef
Methanosarcina sp. WH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NosD
Peptidase_S8
Beta_helix
Pectinesterase
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
AKB21458
UniProt:
A0A0E3KWZ8
LinkDB
All DBs
Position
complement(1419096..1422758)
Genome browser
AA seq
1220 aa
AA seq
DB search
MSKVLLRLFVSAFLVSVFLSGALIFCFSDMQRTSAVEFIQAENDSVNSSISTDAGWQDSS
SGETLSPAQKKLSSDLLQLSDERYLSGKESAETLRARMVKLGQLSQAEPVSRRAVPSGEN
PEIAAGSGENASKASSYPDEKVYVYVYLEPFANSSILAGYCEVEDRDKENHIVVAWVPLE
SLETLAALSEVKNIQTVLPPFVRQGNTVSKGDSILNASSLRGLYGINGTGIKIGIISDGV
DSLKDAQATGDISSDVHVLSNKVGGNEGTNMLEIIHDIAPGAELYFHDCGNNRLEFNGAV
DALVNEGCTVICDDIGWLAEPFFEDGIVADHVKEVVKEHDILYVSSAGNSGNSHYQGVFY
DKGSGWHDFSSGKGDVENLQFEIQPSGEVWVFLQWDDMWEHSGNNYDLYLKDRNTLETLA
SSKVYQDGDNLPLEYIMYTNSGKNALSASIEVRKTSGESRELELYIYCRKGTKLKAANIV
SKDSIFGHPALSEVITVGAVGTEESGDYYIEYFSSIGPVTLHYPSQEIRPKTDISGIDGV
NVTGTGGVSEKFYGTSASAPHVAAIAALVWSASPEKSAMDIRRLLYTSSTDLGEPGYDTV
FGYGLVNALKMHEQASANPSTFTVKTDGSGDFASISDAINNSRPGDSILVYPGTYRENVD
VPWDLNISSASGKPEDTVLEAENPEEPVFHVTANAAKISGFGISGSGGTGVYLESAAACM
LTNNKVSNCSPGVLLEESSNNTFTRNNISNNAEGFRLTDSFQNRILENEFENSININERS
SGETGLSNTWNTAAEVRYLYNGGVYESRFGNFYSDYKGPDTDGSGIGDNPYGSDSSPLIS
RLAAYSRGFEVGNVVPARGSVSIDGDTLEFGIRSTRNCTFSWLLNGVLLQTNESASSAIL
SIGTEELAGRITESKTSTPIPAKYTLTVIAANGSSTLQHSWNLNPYPVEEETDTPEDINE
DNNVSMGGSPGGGNVKISEDSGSKGSGGSGTGGSPEPASNVESKELAQSFVTSGRHILFG
FTRNATPVTAVEFDARKNAGKVTVTVEMLKNQSVLVSGLPEGEVYRHFNIWAGNSGFASP
ENIQGPKISFRVEKDWLSENRIDPVSVSLYRYSTSNWTELSSGITGEDETFFYFESETPG
FESFAVAGQQSESLQSSSNTAMQNNSPETGPDGAPEIRITRENPHNSTEEDSEDNRDMPA
PDFVICIALLLAGTLWIKRK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtattgttgcgtttatttgttagtgcctttctggtctctgtttttctgtca
ggggctctgatattctgcttttcagacatgcagagaacttcggcagttgaattcatccag
gctgaaaatgacagtgtaaacagcagtatttccacagatgcaggatggcaggatagttca
tccggagagaccttaagccctgcacagaagaagctctcaagcgacctgctgcagctgagt
gacgagcgctatctttccgggaaagagtcggctgaaactctgcgagcccgtatggttaag
ctgggacagttgagccaggcagagcctgtttcgagaagggcggttccttcaggagaaaac
ccggaaattgctgcgggttcaggggaaaatgccagcaaagcttcttcttatccggatgaa
aaagtttacgtgtacgtttatcttgagccttttgcaaatagcagcatacttgccggatac
tgtgaggttgaagacagggacaaagaaaatcatattgtagtagcgtgggttccgctcgaa
tcccttgagacactggctgccctttctgaggtaaagaatattcaaactgtcctgcctcct
tttgtcaggcagggaaatacggtttcgaaaggggattcgattcttaacgcttccagcctc
aggggactttacggaataaacgggacaggaataaaaattggaatcatatctgacggcgtg
gacagccttaaggacgcacaggctacgggcgatatttcttcggatgtgcatgtcctgagc
aataaggtcgggggaaatgaaggcacgaatatgcttgaaatcatccatgatattgctccc
ggggcagaactatatttccacgactgcggaaacaacaggctcgaattcaacggggctgtc
gatgcccttgttaacgaagggtgtactgttatctgtgacgatataggttggcttgctgaa
cctttctttgaagacgggatagtggcagaccatgtaaaagaggttgtaaaagagcacgac
atcctttacgtaagctctgctggaaattccggaaacagccattaccagggggttttctat
gacaaagggagtggatggcatgatttcagcagtggaaaaggagacgtagagaacctgcag
tttgagatccagccctcaggagaggtatgggtttttctccagtgggacgacatgtgggaa
cattcgggaaataactatgacctttaccttaaagacagaaatactttagagacccttgcg
tccagtaaagtttatcaggatggggacaatctgccccttgaatatataatgtatacaaat
agtggaaaaaacgcccttagcgcttctatcgaggtccgaaaaacctccggggaatccagg
gaactcgagctctacatttattgccgaaaagggacaaaactcaaggctgcaaatatcgtt
tccaaagactctattttcgggcaccctgccctgtctgaagtgattacagtgggagcagtt
gggacagaggaatctggagattattatatagagtacttctcttccattggaccggttacg
ctccactatccttcgcaggaaattcgtcctaagacagatatctcagggattgacggtgta
aatgtcacaggtacaggtggggtttcagaaaagttttacggtacaagcgcctctgctcct
catgttgcagccattgcagcgctggtctggagtgcgtccccggaaaagtcggctatggac
ataagaaggctgctttacacttcatcaaccgacctcggagaacccggatatgatactgtt
tttggatacgggcttgtaaacgccctcaaaatgcatgaacaggcatcagcaaatccttcc
acatttactgtgaaaacagacggaagcggggattttgcctcaatttcggatgccataaac
aacagcagacctggagattccattcttgtatatccgggaacgtacagggaaaacgtggat
gtaccctgggatctgaatataagctctgcttccggaaagcccgaggacactgttctcgaa
gctgaaaatcccgaggaacctgtttttcatgtaactgcaaatgctgcaaagataagcggg
tttggcataagcggctctggaggaactggcgtatatcttgaaagtgcagctgcatgcatg
cttacgaacaataaggtatcaaactgtagtccgggagtcctgctcgaagagtcatctaac
aatacctttacaagaaacaacatctcgaataatgcagagggattcaggttaacagactct
ttccagaacaggatccttgaaaacgagtttgagaacagtattaatatcaatgaaagatct
tcaggagaaacaggactttcaaacacctggaacacggctgcagaggtacgctacctgtat
aatggcggggtttacgagagccgatttggaaacttttactctgattataagggcccggac
acagacggcagtgggataggagacaatccttatggcagtgactcctcgccccttatttcc
agattggcagcatattccaggggttttgaggtagggaatgtagttcctgcccggggttca
gtttcaattgacggggataccctggaatttgggattcgatctacaagaaactgcaccttc
agctggttgctaaacggagtcctgttgcagacaaacgaatctgcttcttctgcgattctt
tcaattgggactgaagaacttgcaggcaggataacagagagcaaaacttccactcctatc
ccggccaaatataccctgacagttattgccgcaaacggttcttcaaccctgcagcacagc
tggaacctgaacccctatcctgtagaagaagagactgacacgcctgaggacataaatgaa
gataataatgtaagcatgggcggcagtccggggggagggaacgtaaagatttcagaagac
agtggaagtaaaggaagtggaggaagcggtactggcggttcccctgaacctgcaagtaat
gttgaaagcaaggaactggcgcagagttttgttaccagtggaaggcatattctgtttggt
tttaccagaaacgcaacccctgtaacagctgtggaatttgatgccaggaaaaacgccgga
aaagttacagtcaccgtagaaatgctaaaaaaccaatcagttctggtttcaggcctgccg
gaaggagaggtttacagacacttcaatatctgggctggcaacagtgggtttgcatccccg
gaaaacattcagggccctaaaatcagtttcagggtagaaaaagactggctttccgaaaat
agaattgatccggtttcagtttctctctacaggtactctacctcaaactggacagaactt
tcttccgggattacaggagaagatgagacattcttctattttgaatccgaaactccgggg
tttgaatcttttgcagttgccggccagcagagtgaatctttacagtcttcttccaataca
gccatgcagaataactcccctgaaacaggcccggacggagctccggaaatccggatcacg
cgcgaaaatcctcacaactccacagaagaagacagcgaagataacagggatatgccagcc
cccgattttgtgatatgtatcgcccttttgctcgcaggcacactgtggattaaaaggaag
tga
DBGET
integrated database retrieval system
