Methylobacterium sp. AMS5: Y590_06830
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Entry
Y590_06830 CDS
T04283
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Y590_06830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meta03019
]
Y590_06830
Enzymes [BR:
meta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Y590_06830
Messenger RNA biogenesis [BR:
meta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Y590_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AMB44599
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Position
1433437..1434711
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AA seq
424 aa
AA seq
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MITDTLPSSLAPPLVADGPARLLARAGVQACLAALDAPGEETRLVGGCVRDALLGAIVAD
IDLATTLRPEAVMACARAAGIKAVGTGIEHGTVTLVVGGEPHEVTTLREDVETDGRHAVV
RFGRDFVRDAERRDFTINGLSLDAQGRLHDTTGGVADLAAGRVRFIGDAATRLREDALRL
LRFFRFHARYGSGAPDAEGLAASIAARGSLDRLSRERVRAEFLKLLLAPRAVDAVAILSE
TGLLPRILGGVGELGRLARCAAAELRLDATARFSALAVRTIEDADRLQAGLRLSRAEHAR
LTGYAIALAALHDRPVIEADAVPALVATYNAGPLRELLIALDGEPRPRMTPEARAVLDQM
EAAGTRPVLPVTGGDLVARGVKPGRAVGTGLRAARKLWLASGCPDDAEARERLIARALEA
AAAP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgacacgctgccctcatcccttgccccgccgctggtcgcggacggcccggcc
cgcctcctggcgcgggcgggcgtgcaagcctgcctcgcggcgctcgatgcgccgggcgag
gagacgcgtctcgtcggcggctgcgtgcgcgacgcgctgctgggcgccatcgtcgccgac
atcgaccttgccaccacgctgcggcccgaggccgtgatggcctgcgcccgcgccgccggg
atcaaggccgtgggcacggggatcgagcacggcacggtcaccctcgtcgtcggcggcgag
ccgcacgaggtgacgaccctgcgcgaggacgtggagaccgacggacgccacgcggtggtg
cgtttcggccgcgacttcgttcgcgatgccgagcggcgcgacttcaccatcaatggcctc
tcgctcgatgcgcagggacgcctccacgacacgaccgggggcgtcgccgacctcgccgcc
ggccgggtgcgcttcatcggcgacgccgcgacccgcctgcgcgaggatgccttgcggctg
ctgcgcttcttccgcttccacgcccgctacgggagcggcgcaccggatgcggagggcctc
gccgcctccatcgcggcccgcggcagcctcgaccggctctcgcgggagcgggtgcgcgcc
gagttcctgaagctgctgctcgcgccccgcgccgtcgatgcggtggcgatcttgagcgag
accggcctgctcccgcgcatcctcggcggcgtcggcgagctcggccgactcgcccgctgc
gcggcggccgagctgcgcctcgacgccacggcgcgcttttccgcgctcgcggtgcggacg
atcgaggacgcggaccggctgcaggcgggccttcgcctgtcgcgggccgagcatgcgcgc
ctcaccggctacgccatcgccctcgcggccctccacgaccggccggtgatcgaggccgac
gcggtgccggctctcgtcgccacctacaatgccgggccccttcgtgagttgctgatcgcc
ctcgatggcgagccgcgcccgcgcatgacgccggaggcgcgggccgtgctcgatcagatg
gaagccgccggcacgcgccccgtcctccccgtgacgggcggcgacctcgtggcgcgcggc
gtaaagccgggccgggcggtcggcacggggttgcgcgcggcccggaaactctggctcgcc
agcggatgcccggacgacgccgaggcgcgcgagcggctgatcgcgcgagcgctggaagct
gcagccgcgccatag
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