Methylorubrum extorquens PA1: Mext_1377
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Entry
Mext_1377 CDS
T00640
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mex01002
]
Mext_1377
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mex01011
]
Mext_1377
Peptidases and inhibitors [BR:
mex01002
]
Cysteine peptidases
Family C82
Mext_1377
Peptidoglycan biosynthesis and degradation proteins [BR:
mex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Mext_1377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABY29778
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All DBs
Position
complement(1544587..1545891)
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AA seq
434 aa
AA seq
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MLQSARHPHFRPLAAALVAATVLAGPALAREGGFAQAEWAQDYSSPTTMQVHRSSTPILS
PDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTGDLDATAGG
AGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIRLRSYSGDL
GRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPTWTVPASIV
RKDLIPKMQKDPNYLTDNKIRILSGGQEISPRSVNWNSDEGTRYTYRQDSGADFNSMGVV
RINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPGWDRTRVEQA
VESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNVPSTIEAPTPVASAA
STRPEVYEPGDEEN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagcgcgcgccacccccacttccgccccctcgctgccgccctcgtggcggcg
acggtgctcgccggcccggcgctcgcccgcgagggcgggttcgcccaggccgagtgggcg
caggactattcctcgcccacgaccatgcaggtgcatcggtcctcgacgccgatcctatcg
cccgacaccatcgcggcgactgagtcgatggccgagaagtaccgcgccatcgtctcccgc
ggcggctggcagaacgtgagcggcgcggccggtctgcgcgtcggctcccgcggaccggcg
gtggcggcggtgcgccagcgcctgatcgtcaccggcgacctcgacgccacggccggcggt
gcgggcgtctatgattcctacgtcgcggccggcgtgaagcgcttccaggcccggcacggc
ctgtcgcagaccggccagatgagcccggcgacccaggcggcgatgaacgtgcccgccgag
gtgcgcctgcgccagctcgagaccaacgtgatccgcctgcgctcctattcgggcgatctc
ggccggcgcttcgtcatcaccaacatccccgccgccctggtgcagacggtggagaacggc
caggtcgtgacgctgcatgccgcgggcgtcggcaagatcgaccgccagtcgccgatcatg
aacaccaaggcgacgcagatcaatttcaacccgacctggacggtcccggcctcgatcgtg
aggaaggacctgatcccgaagatgcagaaggatccgaactacctcacggacaacaagatc
cgcatcctctcggggggacaggagatctcgccgcgctccgtaaactggaactcggacgag
ggcacccgctacacctaccgccaggattccggcgccgacttcaactccatgggcgtggtg
cgcatcaacattccgaacgcgcacggcgtgttcatgcacgacaccaattcccgcggcgtg
ttcggcgacgacttccgcttcatctcctcgggctgcgtgcgcgtgcagaacgtgcgcgag
tacatcacgtggctgctgaaggacacgcccggctgggaccgcacccgggtcgagcaggcg
gtggagagcggccagcgcatcgacgcgacgctgacccagcccgtaccggtctactggacc
tacatcaccgcctgggcgaccccggacggcacggtgcagttccgcgacgacatctacaag
cgcgacggcgtgaacgtgccctccaccatcgaggcgccgacgccggtcgccagcgccgcc
tcgacccggcccgaagtgtacgagccgggcgacgaggaaaactaa
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