Methylorubrum extorquens PA1: Mext_4284
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Entry
Mext_4284 CDS
T00640
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Mext_4284
Enzymes [BR:
mex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mext_4284
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GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABY32653
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Position
4769444..4772008
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AA seq
854 aa
AA seq
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MSGAGRRRWLRPGPNRGTSQTMSSPIPALPIEAALPALRAALSGRSSAVLVAPPGAGKTT
RVPLALLDEAWLGAQKIILLEPRRLAARGAAERMAATRGERVGDTVGLRVRLGSKISART
RIEVVTEGVFTRMILDDPELTGIGAVLFDEFHERSLDADLGLAFALDAQGALREDLRILV
MSATLDGARVAGLLGDAPVVESEGRAYPVETRHLDRDPNQRIEDAMAAAILRALRADPGS
VLAFLPGQAEIRRTAERLEGRLPDDTDLAPLYGALTQGEQDRAVAPAPPGRRKVVLATSI
AETSLTIQGVRIVVDSGLARVPLYEPGNGMTRLVTARASRASVDQRRGRAGRTEPGVCWR
LWPEAATAALEPFARPEILSADLAGLTLDCAAWGVTDPTALSFLDPPPAPALAEARAMLA
DLGALDSDGRLTETGNTLRSLPLPPRLARMVARAAESGQARMAADFAAVLVERGLGGDAV
DLAERLDRFRRDRGGRSADMRRLAEGWARQASKAASKAADAVEPDPLMAEPGALLALAYP
DRVARARGREGAFLMANGRAGLVDPVSPLAREPFIVVADLTGAAASARILSAVAIASEAI
DALFADRIGTVRSVSFDKEARALRAREGRRLGAVTLDERTLPVPADGEAARVLARGIAGL
GLDRLPWTPALAQWRTRVRFLHGAQGGAEGGEWPDLSDEALAASVEEWLAPAIVGRTSLA
AITADDLGQALQGLLPWTLRARLETEAPSHVEVPTGSRIPVDYESGPEPVLAVRVQELFG
LDRHPALGGGRVPLVLHLLSPAHRPIQITRDLPGFWRGSWGAVRSEMRGRYPRHPWPEDP
LSEAPTRRVKPKGT
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcggggcggcggcgatggttgcgccccggcccgaaccgcggcacctcgcag
accatgtcctcccctatccccgcacttccgatcgaggccgcccttcccgccctgcgcgcg
gccctgtccgggcgatcctccgccgtgctcgtggccccgcccggcgccggcaagaccacg
cgggtgccgctggccctgctcgacgaagcgtggctcggcgcccaaaaaatcatcctgctg
gagccccggcggctcgccgcgcgcggtgcggccgagcgcatggccgccacccgcggtgag
cgggtcggcgacacggtgggtctgcgcgtgcggctcggctccaagatctcggcccgcacc
cggatcgaggtcgtcaccgagggcgtgttcacccggatgatcctcgacgatccggaactg
accgggatcggcgcggtgctgttcgacgagttccacgagcgctccctcgatgccgatctc
gggctggccttcgccctcgatgcgcagggcgcgctgcgggaggatctgcgcatcctcgtg
atgtcggccaccctcgacggcgcccgcgtggcggggcttctcggtgacgcgcccgtggtg
gaatcggaaggacgcgcctacccggtcgagacccgccatctcgaccgcgacccgaaccag
cgcatcgaggacgcgatggccgccgcgatcctgcgggcgctgcgggccgatcccggctcg
gtgctcgccttcctgccggggcaggcggagatccggcgcaccgccgagcggctggagggg
cggctgccggacgacaccgacctcgcgcccctctacggcgccctcacccagggcgagcag
gatcgggcggtggcccccgcacccccagggcggcgcaaggtggtgctggcgacctcgatc
gccgagacctcgctgacgatccagggcgtgcgcatcgtcgtcgattccgggctggcccgt
gtgccgctctacgagcccggcaacggcatgacccggctcgtcaccgcgcgggcctcgcgt
gcctcggtcgatcagcgccgcggccgcgccggccgcaccgagccgggtgtctgctggcgg
ctctggccggaggcggcgaccgcggcgctcgaacccttcgcccggcccgagatcctctcg
gcggatctggccgggctgaccctcgactgcgccgcctggggcgtcaccgaccccaccgcc
ctgtccttcctcgatccgccgcccgcgccggccctggccgaggcgcgggcgatgctggcc
gatctcggcgccctcgattccgacgggcggctcacggagaccggcaacaccctgcgcagc
ctgccactgccgccccggctcgcccgaatggtcgcccgcgccgccgaatccggtcaggct
cgcatggcggccgatttcgccgccgtgctggtcgagcgcggcctcggtggcgacgctgtg
gatctcgccgagcgcctcgaccgcttccgccgcgaccgcgggggccggtccgccgacatg
cgccgcctcgcggaaggctgggcgcggcaggcgtccaaggcggcgtccaaggcggcggat
gccgtcgagcctgaccccctgatggccgagcccggcgccctgctggcgctggcctatccc
gaccgggtggcgcgggcgcggggccgggagggcgccttcctaatggcgaacggccgcgcc
ggcctcgtcgacccagtgagcccgctcgcccgcgagcccttcatcgtcgtcgccgacctc
acgggcgcggcagcctccgcgcggatcctgtccgccgtggccattgcgtctgaggccatc
gacgccttgttcgccgaccggatcggcacggtgcgcagcgtcagcttcgataaggaggcg
cgggccctgcgcgcccgcgagggacgccgcctcggcgccgtgacgctcgacgagcgcacc
ctccccgtccccgccgatggggaggcggcgcgggtgctggcccgcggcatcgccgggctc
ggcctcgaccgcctgccgtggacgcccgccctggcgcagtggcgcacccgtgtccgtttc
ctccacggagcccagggaggggcggagggcggcgaatggcccgacctctccgacgaggcc
ctggcggcgagtgtcgaggaatggctcgccccggccatcgtcgggcggacctcgcttgca
gcgatcaccgccgacgatctcggccaagccctgcagggtctgctaccctggacgctgcgc
gcccgcctggagacggaggcgccgagccatgtcgaggtgccgacgggctcgcgcatcccg
gtcgattacgaatccggccccgaaccggtgctcgcggtgcgggtgcaggagctgttcggc
ctcgaccggcatcccgcgctcggcggggggcgggtgccgctggtgctccacctgctctcg
ccggcccaccgcccgatccagatcacccgcgacctgccgggtttctggcgcggctcttgg
ggcgcggtccgctccgagatgcggggtcgctatccccgccacccgtggccggaagacccg
ctcagcgaggccccgacccggcgggtgaagccgaaggggacgtga
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