Methanothermus fervidus: Mfer_0181
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Entry
Mfer_0181 CDS
T01351
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mfv
Methanothermus fervidus
Pathway
mfv03030
DNA replication
mfv03420
Nucleotide excision repair
mfv03430
Mismatch repair
mfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mfer_0181
03420 Nucleotide excision repair
Mfer_0181
03430 Mismatch repair
Mfer_0181
03440 Homologous recombination
Mfer_0181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfv03000
]
Mfer_0181
03032 DNA replication proteins [BR:
mfv03032
]
Mfer_0181
03400 DNA repair and recombination proteins [BR:
mfv03400
]
Mfer_0181
Transcription factors [BR:
mfv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Mfer_0181
DNA replication proteins [BR:
mfv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Mfer_0181
DNA repair and recombination proteins [BR:
mfv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Mfer_0181
MMR (mismatch excision repair)
Mfer_0181
DSBR (double strand breaks repair)
HR (homologous recombination)
Mfer_0181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
DUF5088
DZR_2
DZR
zf-ribbon_3
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
ADP76984
UniProt:
E3GXF2
LinkDB
All DBs
Position
179310..181685
Genome browser
AA seq
791 aa
AA seq
DB search
MNKKLREKYEKIKDKISEEEFLELIEKKKKEFEDIRFMKDSNDEEIAELVVSEFLEGKNE
YLSDKEEFAMDKISKIEEGAENLTVKGRVMRISNPRKFVDQRGKEGKVANVLLADDTGEI
RAVFWTENIPLLEKINEGDIIEIKGVEAKRGFGGRKEVHLQPRSEIKKLKAEEYPEFPEY
EEKFIKIGEITGDQSEVNVMGRIVHISPIRTYKRDGKEGKMAAIKLKDDSGEIRYLLWNR
DVDIINDLKLKEGDAVKILGAQVRERDDEIYLSHGGLSRIEKGDYDVPKFKPKVHKIGEL
HGEERDVTVIGLVTKVQDIVKFERPDGTKGAVKSIKIKDDTGSTYVKLWGEDAKLKINKG
DVIKVVGGNVVFDDFTSSYCINTNWNTRIEINPENISNELSNLLKEYKNELKPKKIGTIL
EMDSEEGEEVDVLGRVISVSEPREFQRDDGIGIVRSVEIADETGIIRASFWDDKASEKID
IGDVLQIENARIRIGSYGVELSVGKTSRVIRKENTAVPSLEELEKKIFVTKNIKDLERDD
RHIKIIGRIIDIGEIAENQREDGSIIKFRRMEVADKTGTIEVSLWDDKYNLPLDIGNVVE
IYNPRVVLRNERLELRVGRSSEIKVLKNAKDIPKLEELVDLHWPKKDIKDLEPGDRNVRI
TGKIVEISGSRPISYRCPNCHERIDITEESVCNFCGEPIDEPEHLLVIPAKLVNDTGEIR
VVFFRREAEELIEMKTEEIVEIINEVGEENALEDRIKSFEGIDVTLLGYVSADEYTGELT
FIPRKIIKKEL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaaattaagagaaaaatacgaaaaaattaaagacaaaatatcagaagaagaa
tttttagaactgatagaaaaaaagaaaaaagaatttgaagatattagatttatgaaagat
agtaacgacgaagaaatagctgaattggtagtaagtgaatttttagagggaaaaaacgaa
tatttatctgataaagaagaatttgcgatggataaaatatctaaaattgaagaaggtgct
gaaaatttgacagttaaaggtagagtaatgagaatatcaaatcctaggaagtttgtagat
caaagaggtaaagaaggtaaggtagcaaacgtattattagcagatgatacaggagaaatt
agagctgtattttggacagaaaatattcctttacttgagaaaataaatgaaggagacata
attgaaataaaaggtgttgaagctaaaagagggtttggtggtagaaaagaagtacattta
cagccaagatcagaaataaaaaaattaaaagcagaagaatatccagaatttcctgaatat
gaggaaaaattcataaaaatcggtgaaattactggagatcaatcagaagtcaatgttatg
ggacgtatagtacatatatctcctataaggacatataaacgggatggtaaagaaggaaaa
atggcagcaataaaattaaaagatgatagtggtgagataagatatttactttggaatagg
gacgtagatataatcaatgatttaaaacttaaagaaggagacgctgtgaaaatacttgga
gctcaagttagagaacgagatgatgaaatttatttaagtcatggtggtttgagtagaata
gaaaaaggtgattatgacgtacccaaatttaaacctaaagtacataaaattggagagctc
catggtgaagaacgtgatgtaactgtaattggattggttacaaaagtccaagatattgtt
aaatttgaaagacccgatggaacaaaaggagctgtaaaatcaattaaaataaaggatgat
actggatctacatatgtaaaactttggggagaagatgcaaaattaaaaattaataaagga
gatgtaattaaagtagttggaggaaatgttgtatttgatgactttacatcttcctattgt
ataaatacaaattggaacactaggatagaaattaaccctgaaaatataagtaatgaatta
tcaaatcttttaaaagaatataaaaatgaattaaaaccaaagaaaataggtacaatatta
gaaatggatagtgaagaaggtgaagaagtagatgtactaggtagggttataagtgtaagt
gaacctcgtgaatttcaaagagatgacggtattggtatagtgagatctgtggaaatagct
gatgaaactggaattataagagcttcattttgggatgataaagcctctgaaaagatagat
ataggtgatgtactacaaatagaaaatgcgcgtattagaataggaagttatggtgttgaa
ttaagtgttggaaaaacatctcgagtcattcgaaaagaaaatacggcagttccatctctt
gaggaacttgagaaaaagatttttgtaacaaaaaatataaaagatcttgaaagagatgat
aggcacataaaaattattggacgtattattgatattggcgaaattgctgaaaatcaaaga
gaagatggttcaattatcaagtttagaagaatggaagttgcagataaaacaggtacaatc
gaagtttcactttgggatgataaatataatctaccactcgacattggaaatgtagttgaa
atttataatccaagagttgttttaagaaatgaaaggttggaattaagagtaggtaggtca
tcagaaataaaagtattgaaaaatgcaaaggatattccaaaacttgaagaactggtggat
ttacattggccaaaaaaagatattaaggatttagaacctggagataggaacgtaagaata
actgggaaaattgtagaaatttcaggtagtagaccaatatcctaccgttgtccaaattgt
catgaacgtatagatataactgaagaatctgtatgtaatttctgtggtgaaccaatcgat
gaaccagaacatttactagtgatacctgctaagcttgtcaatgacactggagaaatacgt
gtggtatttttcaggagagaggctgaagaattgattgagatgaaaactgaagaaattgtc
gaaataatcaacgaagttggagaagaaaatgcattagaagatagaattaaaagttttgaa
ggaatagacgtaactcttttgggatatgtgagtgcagatgaatatactggagaactcacg
ttcattccccgaaaaataattaaaaaggaactataa
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