Mycoplasmoides gallisepticum R(low): MGA_0569
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Entry
MGA_0569 CDS
T00131
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mga
Mycoplasmoides gallisepticum R(low)
Pathway
mga03030
DNA replication
mga03410
Base excision repair
mga03420
Nucleotide excision repair
mga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGA_0569 (lig)
03410 Base excision repair
MGA_0569 (lig)
03420 Nucleotide excision repair
MGA_0569 (lig)
03430 Mismatch repair
MGA_0569 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mga03032
]
MGA_0569 (lig)
03400 DNA repair and recombination proteins [BR:
mga03400
]
MGA_0569 (lig)
Enzymes [BR:
mga01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MGA_0569 (lig)
DNA replication proteins [BR:
mga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MGA_0569 (lig)
DNA repair and recombination proteins [BR:
mga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MGA_0569 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MGA_0569 (lig)
MMR (mismatch excision repair)
DNA ligase
MGA_0569 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MGA_0569 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AAP57050
UniProt:
Q7NAF8
LinkDB
All DBs
Position
complement(970907..973054)
Genome browser
AA seq
715 aa
AA seq
DB search
MIEKKNESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLS
YSPTQRVGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAKISKQEDNPYVLEPKI
DGLSISLIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTTIKKIVIRGEVYVSN
QDFEAINASRDEDKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYELGFETQYQ
VIQQLKEWGFNVAKEIKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIG
YTSKFPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNL
EYINDLDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPEE
VDWYCIYDQCKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITNQN
VSEDLSLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEKSF
DKLINSINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLADIS
SITANSLFSFFSDEKNWELIEQLKTLSINTKDEINNDLVDSSSIYYDKKFVITGSFSISR
NDIIKKLSLKYKIKFVSGVSKNVDFVLAGNSPTAKKINQAKVLNIPIIQEEIWNK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaagaaaaacgaaagtattaaagagataatcgaagatttagttaaaaaatta
actaaatgagaacatgagtattatgttttatctaacccaagtgtttcagatgaagtatat
gataatacttatcgaactttactaggttatgaaagaaaatacccacaatacgttttaagt
tattcccccactcaaagagtgggatcatcaattagcaataagttcattaaagttaaacat
gattacttgatgttatcattgggcaactgctttaattttgaagagttgcttaactttaat
gaaaatattgctaagataagtaaacaagaagataatccttacgtgttagaacctaagatt
gatggtttatcaatctcattaatttatcttgacggcgtgttatctgaagcacttactagg
ggtgatggggtttttggtgagagtgtgatagctaatatcaaaacaattaaaacaatccca
ttaaaaattaatacaacgatcaaaaagatcgttatccgtggagaggtctacgtaagtaat
caagactttgaagcaattaatgcttcaagagatgaagataagaagtttgcgaactctaga
aactatgcttctggaagtttaagaaacattgatgttagtgaagttgccaaacgtaaactt
aatgcgttcttttattatattcccaacgcttatgaactaggttttgaaacccagtatcaa
gtgatccaacagttaaaagaatgaggctttaatgttgctaaagagattaagttatttagc
aacattaaagaactttacaccagtcttaaagaactagaaaacaacaagaataaattagat
tatcgaatcgatggagctgtaatcaaatataacaacttcaaggattatgaaataatcggt
tacacctctaagtttcccaaatgagcaatcgcatacaagtttgcacctactcaggtgcaa
acccaattaaaagatattatccttaacgttggtcgaactggaaaactaacttttgttgca
caactagccccaattgaattagaaggttcgattatcacttatgcaactttacataactta
gagtatatcaacgacctagatatcaggattaatgactacgtatatttaattaaggctgct
gagatcatccctaaggtgattggtgtaaatctagataaacgaccgaataatgctaaaaaa
cttgagtttgattacaactgtccaagttgtcatcaacctctagtaaaaaaacctgaagag
gttgattgatattgtatttatgatcaatgtaaacaaaagcaattgcaatatctaatctat
tattgttctaaaccaataatgaacattgaaggtttgagtgaaagcactttagctttattc
tttaatactaaagttaatgatgttattagagaatgtaatgaattaatcaccaatcaaaat
gttagtgaagatcttagtttatttaagttattagataatgaagaacaaacgtttgttaat
agcgttttagatatttatcaattagaacgatacaaagagattattatcaaaccttggctt
aagaaggggttttctaaatcatctttaaaatataactttagatttcaagagaaatcgttt
gataaattaattaacagtattaatgaatctaaaaaccgagaattatatcggttattggct
gcacttaatattaaatatattggaatagcaacagcgaagtcgattgctaatacatatcac
gatattgatcaacttaaaaacttaactgttgaagattacatgcgattagctgatattagc
agcataactgctaattcactatttagttttttctcagatgaaaaaaattgggaattaatt
gaacaattaaaaactttatcgattaacactaaagatgagattaataatgatttagttgat
agttcatctatctactatgataaaaagtttgtaatcactggttcttttagtatctcacga
aacgacattattaaaaaactatctttaaaatacaaaattaagtttgtaagtggtgtgtct
aaaaacgttgattttgttttagcgggtaacagtccaacagctaaaaaaattaaccaagcc
aaagtgctaaatattccgatcattcaagaagaaatctggaacaaatag
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