Meleagris gallopavo (turkey): 100538933
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Entry
100538933 CDS
T01523
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X2
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100538933 (DDX60)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100538933 (DDX60)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100538933 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100538933
NCBI-ProteinID:
XP_010707780
Ensembl:
ENSMGAG00000002432
LinkDB
All DBs
Position
4:complement(4815021..4854102)
Genome browser
AA seq
1828 aa
AA seq
DB search
MDSAEDNFKKAAHDYSSESADSDDNDSKCVDSEKINFTATEEDKESESTSDSDEEDATDY
DEEAAVVQMLKEKEDREKEDEDPDHGEIYCISTTDEVIRHESQNEGRDFRVFQNKLNSQN
LEIRKHREILMKLKQNIWPSLSKASFVSLLKDFVESEFFVIDGDSLLLMFLNEEVQHLTL
FYLIECFLHDFTQKGAKYIIVFFKDVEQMYFQNPQFLFLRTALIEHLKHNTCITIHTEFS
NCFSPQWEIFLKKSYPYFIIISDIGLTSLQTNYLTIFIAHSLSKKINVVHAFGQEYDTLR
VYGYHLQSMWKHRIFFQKYEKDLQCACEAIVRYKELSMYLYGPLKLSLKSIKNEVYQTVL
LLKKLWPEGSDIRRVTCVLTCAVGLKLYSDVLESAHASLGAKPEQSERERSKPLSPEEAT
DLCRMQCLTTVFLLHMPLSQRAQIRIMKSCWTKQVLPLIKMQQLCAHFVLKQLSDTNDWK
LDLTYLPDLNDDSLLRNLAHYYEIEYSEGLEFQKELGEEMDKEYRFLWDTVTKLTVNYDF
GDAFPIRNTSQIFIDHQQTSFRVCDEKIPDIGLIPLKSDLVEEYAGDVLKDLPVLESNNP
VVTSLAKYKEFDELHHWHSGRPLTEEYERVPCNADAKSKDADGRKQIQKLQTFHRLYGST
LEGGTSKFIVCRKDASGKADGAMKKTKIHKSKAEIIMEENNRRLKAKEEKREQEQWKTLQ
IPMEKEIKANLTVGINKLEKFLKTVKSKSVKFSVEMSGLSACVEAWKKHCRKQGNKPEDL
SSAVQVMRRIHILLEKYQDLLEKSHLQKLSQYLQLLGFENLACTLSGQALQMREERDDRN
RSNYDVEVGPARFQLQYMDYYLLREERNDPDPRVQHFIPDTWQRELLDAVDNNESAVIVA
PTSSGKTYASYYCMEKVLKTSDEGVVVYVAPTKALVNQVVGSVYSRFTKKLPDGLVVCGV
FTRDYRHDVMNSQILVTVPQCLEILMLSPHHQSWTKRIQYVIFDEIHCLGGEIGAEVWEH
LLVTIRCPFLALSATISNPDHLTEWLQSVKRYWQCADNKIKGGSTDSEKNFAGKYKGRST
VREQKKSYRVRLVLYEERYNDLEKYVCSLTGSDFVIEHFHPCAALTVNHIENYGIPSDLS
LSPRESVQLYDTMVKVWQKWPRAQEMDPEEFVSFKNKVVIKKMDVRKYEQELKMELSNWI
VVGQRQKVNEVLENLKPKPVDCSEYQKWKKFALFVDKLHEMGKLPAIFFIFGLDSVEKAA
RNVFLNLLKKQFNEHDPKMEKEVEDIRNKLRKVNKTLMKFENMDTKRVKPSKMESMVMLL
SMKKQLQERLKKLTAIPSTCTYADPKAVDEDTLRKIFYRLRFQKNSYLHQVLARRGIGYH
HGAMAMRERQTVEMLFRLGYIKVVTATSTLALGINMPCRSVVFADDSVFLDALNYRQMSG
RAGRRGQDMIGDVFFYDIPLPKVERLIKSNVPQLKGQFPLTISLILRLMLLAAKADDKMD
ARAKALSVLKHSLMSFKKERYAGVLKIYFMFSLQFLIKEGYLDQEGNPIGFAGLVTHLNY
HEPSNFVLVSFLVKGLFHKLCQPIKEGSTDFSDEVLEKLVLILANLFGRRYLPACSKAFK
HTFYQSKVFLEDLPEDFADAVNEYNTKVEENFAHFLLTTAKLADMEEEYRLPLSKTDFTS
EKWHGSELASYLMDNTKRISAVSPFACLSGVADDDLFHGENINNAVLRSLGINVKNCPLL
YLKKYDNQGRSLPLNAYALDFYKHGSLTVVATDNWLNEGDAYYLLKDFLLLIQSIRTSLS
ELCDDPNDNVLLAFQKLAEVYQSKFNAV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcagaagataatttcaagaaggctgctcatgattattcaagtgagagtgct
gatagtgatgataacgatagcaagtgtgttgatagtgagaaaataaacttcactgcaact
gaggaagacaaagagagtgagagtacgagtgacagtgatgaggaggatgcaaccgattat
gatgaagaagcagctgttgtgcagatgcttaaagaaaaggaagacagagaaaaagaagat
gaagacccggatcatggtgaaatttattgtatctcaaccactgatgaagtgatacggcat
gaatcacaaaatgaaggcagggatttcagagttttccagaataaattgaattcccaaaac
cttgaaataagaaaacatcgtgaaattctgatgaaactgaagcaaaacatttggccatct
ctatcaaaagcatcgtttgtcagtctgttaaaagactttgttgagtctgaattctttgtg
atagatggggattccttacttcttatgttcttaaatgaggaagtacaacatctaacacta
ttttacctaattgaatgctttctgcatgatttcactcaaaaaggagcaaaatacattatt
gttttcttcaaggatgtagagcaaatgtacttccagaatcctcagtttcttttcttacgt
actgcattaatagaacatctgaagcacaacacgtgcatcaccattcacacagaattttcc
aattgtttttcaccacaatgggagatttttctgaagaaatcctatccttatttcatcatc
atatctgacataggtctgacctctctccaaaccaactatctgactatttttattgctcat
tcactgtcaaagaaaatcaatgttgtacatgcttttggacaggaatatgacactcttaga
gtttatggatatcatcttcagagtatgtggaaacacagaattttttttcaaaagtatgaa
aaagatctgcagtgtgcctgtgaagccatagtcaggtacaaagaactgtccatgtacctg
tatggacctctcaagctgagcctgaaaagcataaaaaatgaggtttaccagactgtcctt
ctgttgaaaaagctgtggcctgaaggatctgacattcgtcgtgtgacctgtgttcttact
tgtgcagtgggattaaaactgtacagtgacgtgctggaaagtgcacatgcttccttggga
gcaaaaccggagcaatcagaaagagaaagaagtaaaccactatctccggaagaagccact
gacctctgtagaatgcagtgtcttacaacagtttttcttctgcatatgcctctttctcag
agagctcagattaggatcatgaaatcctgctggactaaacaagttttacccttaataaaa
atgcaacagctgtgtgcacattttgttctgaaacagctaagtgatacaaatgattggaaa
ctggatttaacttatctgcctgacttaaatgatgattcgctgctcagaaatcttgcacat
tactatgagattgaatactctgaaggattagagttccaaaaggaattgggggaagaaatg
gataaagaatacaggtttttatgggacaccgtaaccaaactgactgtgaactatgatttt
ggagatgctttcccaatacgaaatacttctcaaatatttattgatcatcagcagacatca
tttagagtctgtgatgaaaaaattcctgatataggactaatcccattgaaatctgatctt
gttgaagaatatgctggtgatgttttgaaagacctacctgttttagaaagcaataatcct
gtagttacttcacttgctaaatacaaagaatttgatgagcttcatcactggcattctggc
agaccactgactgaggaatatgaacgagtaccatgcaatgcagatgcaaagtccaaagat
gcagatggaagaaaacaaattcaaaagcttcagacttttcatcgtttatatggaagcact
ttggaaggtggcacttcaaagtttattgtatgccgaaaggatgcttcaggaaaggctgat
ggtgctatgaaaaagactaaaatacacaaaagcaaagcagaaataattatggaggaaaac
aacaggcgactaaaagctaaagaagaaaagagagaacaggagcaatggaaaaccttgcag
ataccaatggaaaaggaaataaaagcaaatctgacagttggaataaataaattggaaaag
tttctcaagacagttaaaagtaaatctgtgaaattcagtgtagaaatgtcaggattgtcg
gcctgtgtagaagcatggaaaaaacactgcagaaaacaaggaaacaaacctgaagattta
agcagtgctgtccaagttatgagaagaattcatatactgcttgaaaaatatcaagatctt
ttggagaaatcacacttacagaagctgagtcaatatctacaacttcttggatttgagaat
ttggcatgtactctgtctggccaggccttacagatgagagaagaaagagatgatcggaat
agaagcaactatgatgttgaggtgggaccagctcgctttcagctgcaatacatggactat
tacttgctcagagaagagaggaatgatccggatccccgcgtgcaacacttcataccagac
acatggcagcgagaacttcttgatgctgtagataataacgagtctgcggtgattgttgct
cccacatcatcaggaaaaacatatgcttcatattactgcatggagaaagttctgaaaaca
agtgatgaaggagtagttgtgtatgttgctcccacaaaggcacttgtaaaccaagtggtt
ggatctgtatacagtcgattcaccaagaaacttccagatggattggtggtgtgtggagtc
ttcacacgagattatcgccacgatgtcatgaattctcagatactagtgactgtgcctcag
tgtttagaaattttgatgctgtctcctcatcaccagagttggaccaaaagaatacagtac
gttatatttgatgagatccattgtcttggcggtgaaattggagcagaggtttgggagcat
cttctggtaacaattcggtgtccatttttggctctctctgctactatcagtaatccagat
cacctgactgagtggttacaatctgtgaaaaggtattggcaatgtgctgataataaaata
aaaggaggctctactgactctgagaagaacttcgcaggaaaatataaaggaagatctaca
gtaagagaacaaaaaaaatcataccgtgttagattagtcctgtatgaagaaagatacaat
gatttggagaaatatgtgtgttctctaacaggcagtgattttgtcattgaacattttcac
ccttgtgctgcattaacagtcaatcatattgagaactatggtattccttcagatctttcc
ctgtctccaagggagagcgttcagctgtatgacacaatggtaaaagtctggcagaagtgg
ccaagggcacaggagatggaccctgaggagtttgtctctttcaagaataaggtagtgata
aaaaagatggatgtgaggaagtatgaacaggaactgaagatggagttaagcaactggatt
gtagttggacaaagacaaaaggtgaatgaggtactggagaacttaaagcccaaacctgtg
gattgctcagaatatcagaagtggaagaagtttgcactctttgttgacaaattgcatgaa
atgggtaaattgcctgccatattttttatatttggcttagattcagtggaaaaggcagcc
aggaatgtcttcctgaatttgctgaaaaaacaattcaatgaacatgaccctaaaatggag
aaggaagtagaagatataaggaacaaattaagaaaagtgaataaaacactaatgaaattt
gaaaatatggataccaaaagggtgaagcctagtaaaatggaaagcatggtgatgctttta
tctatgaaaaaacagctacaggaaagacttaaaaagcttactgcgatcccttctacgtgt
acttatgctgatcctaaagcagtggatgaagatactttgaggaagattttttatcgactt
aggtttcagaaaaatagttatctgcatcaagtgctggcacggaggggcattgggtatcat
cacggagctatggccatgagggaaagacaaacagtggagatgcttttcaggctgggatat
atcaaggtagtcacagctacttcaactctagctctagggatcaacatgccgtgtaggtct
gtggtctttgctgatgattctgtctttttagatgcactaaattacaggcagatgtcagga
cgtgctggaagacggggacaagatatgattggagatgtgttcttttatgatattccactg
cccaaggttgaaagacttatcaaatccaatgtacctcaattgaaaggccagtttcctctg
actatttccttaatactgagactcatgctgttggctgcaaaggctgatgacaaaatggat
gccagagcaaaggcattgtcagtgctgaagcactcattgatgtcattcaaaaaagaaaga
tatgctggagtattaaaaatttattttatgttttctttgcagtttcttatcaaagagggc
tacttggatcaagaaggtaaccccataggttttgctggacttgtgacacacttaaactac
cacgaaccttcaaattttgtcttagtgagttttcttgtgaaaggtttattccacaaactg
tgccagccaattaaggaaggctcaactgatttctcagatgaagtcctagagaagctggtg
cttattctagcaaatctgtttgggagaagatatcttccagcctgctcaaaggcatttaaa
cacacattttaccagtccaaggtctttctagaagatctgccggaagactttgcagatgct
gtaaatgagtacaacaccaaagttgaggaaaactttgctcattttcttctgacaacagcc
aagctggcagatatggaagaagaatacagacttccactctcaaagacagattttacatct
gaaaaatggcatggctctgaactagcatcttacttgatggacaacaccaaacgcatatct
gctgtctcaccatttgcatgcttatctggagtggctgatgatgatctatttcacggggag
aacattaataatgctgtactacgctcccttggaattaatgtcaaaaactgccctctgctt
tatttgaagaagtatgataatcaaggaagaagcttgccactcaacgcatatgcactagac
ttttataagcacggctctttgactgttgtggcaactgataactggctaaatgaaggagat
gcatactacctcctcaaggactttctactcctcattcagtctatacgaacatcactgagt
gaactgtgcgatgatccaaatgataacgttctactggcatttcaaaaactggcagaagtc
taccaaagtaaatttaatgcagtctga
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integrated database retrieval system
