Marinithermus hydrothermalis: Marky_0446
Help
Entry
Marky_0446 CDS
T01457
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhd
Marinithermus hydrothermalis
Pathway
mhd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Marky_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhd03021
]
Marky_0446
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_0446
Enzymes [BR:
mhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Marky_0446
Transcription machinery [BR:
mhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Marky_0446
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Marky_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AEB11198
UniProt:
F2NL09
LinkDB
All DBs
Position
424092..427457
Genome browser
AA seq
1121 aa
AA seq
DB search
MKKFKRFGQIQEVIPLPPLTQIQVESFRKALQLDVPPHQRENIGIQAAFREVFPIEEGER
GRGGLVLDFLEYRLGDPPFSPDECREKDLTYQAPLYARLQLIHKDSGLIKEDEVFLGDLP
LMTPDGSFIINGADRVIVSQIHRSPGVYFTMDPNRPGRYVASIIPLPKRGPWIDLEFDSS
GALLMKVNKKKFPVVLLLRVLGHDEVSLKRELARYGDLINAVLDEGVFEMSPQEALLRLF
TVLRPGDPPKRDKAVSYLYSLLADPRRYDLGEAGRYKVQHKLGVEMPDRTLLSFKDGEFK
DEALLATLKYLLGLQAGLEGYEPDDIDHLGNRRIRTVGELLADQFRVGLGRMARGVRERM
LMGSPEAATPAKLINNRPLAAAIREFFGRSQLSQFKDQTNPLSELRHKRRISALGPGGLT
RERAGFDVRDVHRTHYGRICPIETPEGANIGLISSLAAYGTINELGFIMTPYRRVVDGRV
TDEVHYMTADEEDRYTIAQANTPLDDEGRIATEKVVARRKGEPVIVPASEVEFMDVSPKQ
VFSVNTNLIPFLEHDDANRALMGSNMQAQAVPLIRADAPVVGTGIEDRVVRDSLTSVYAD
VDGVVRYVDGERIVIEQENGNVREYVLSRFVRSNQGTTLDQRPRVNVGQRVKRGDLLADG
PSADHGRLALGQNVLVAIMPFDGYNFEDAIIISEDLLRRDYYTSIHIERYEIEARDTKLG
PEKITRDIPNLSEAALRDLDEDGIVRVGAEVKAGDILVGRTSFKGETEPSPEERLLRSIF
GEKARDVKDTSLRVPPGEGGIVVRTVRLKRGDPGVELKPGVREVVRVYVAQKRKLQVGDK
LANRHGNKGVVSKILPPEDMPHLPDGTPVDIVFNPLGVPSRMNLGQILETHLGLAARELG
FTFVTPIFDGATEAEIKALLDEAFTLRWAQREQSNLGIDVREREVLKRAAKQGLVPADLP
EVEQLRELFKQGKVVLYDGRTGEPIEGPIVVGLMYVMKLYHMVEDKMHARSTGPYSLITQ
QPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAVVKGGDVPE
PSVPESFRVLVKELQALGLDVETYDENDRPIDIFEGLASRR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattcaagcggttcggtcagatccaggaagtcatccccctgccgccccttacc
cagatccaagtcgaatccttccgcaaagccctccagctcgatgtacccccgcaccagcgg
gagaacatcggtatccaggcggccttccgtgaggtcttcccgatcgaggaaggggagcgg
gggcgcggcgggctggtgctggacttcctggagtaccgtctgggcgatccccccttctcg
ccggacgagtgccgggagaaggacctcacctaccaggccccactgtacgcccgactgcag
ctgatccacaaggactccgggctgatcaaggaggacgaggtcttcctcggggacctgccc
ctcatgacccccgacggctccttcatcatcaacggggcggaccgggtgatcgtcagccag
atccaccgttcgcccggggtgtacttcaccatggaccccaaccgccccggccggtacgtg
gcctcgatcatcccgctgcccaagcgcgggccctggatcgacctcgagttcgactcgagc
ggggccctcttgatgaaggtcaacaagaagaagttcccggtcgtcctactcctccgggtg
ttggggcatgacgaggtcagcctgaagcgcgagctcgcgcgttatggggacctgatcaac
gcggtgctcgacgagggcgtgttcgagatgagccctcaggaggccttgttgcgcctgttt
acggtactgcgtccgggggacccgcccaagcgggacaaggcggtgagttacctgtactcg
ttgctcgctgacccgcggcggtatgacctgggggaggccggacggtacaaggtccagcac
aagctgggcgtggagatgccggaccgcaccctcctgtccttcaaggacggggagtttaag
gacgaggccctgctcgcgaccttgaagtacctcctgggcctgcaggcggggctcgagggg
tacgagccggatgatatcgaccacctggggaaccgccgcatccggacggtgggtgagctg
ctggcggaccagttccgcgtggggctggggcgcatggcccgcggggtgcgcgagcgcatg
ctgatgggttcgccggaggccgcgacccccgctaagctgatcaacaaccgccccctcgcc
gctgcgattcgggagttcttcgggcgcagccagctctcgcagttcaaggaccagaccaac
cccttgagcgagctgcgccacaagcggcgcatctcggccttgggccccggggggctgacg
cgcgagcgcgcgggcttcgacgtgcgtgacgtgcaccgcacgcactacgggcgcatctgc
ccgatcgagacgccggaaggcgcgaacatcgggttgatctcctcgctcgcggcgtacggc
acgatcaacgagctgggcttcatcatgacgccctaccgccgggtggtggacggccgggtg
accgacgaggtgcactacatgaccgcggacgaggaggaccggtacaccatcgcccaggcc
aacacccccctcgacgacgagggacgcatcgcgacggagaaggtggtggcccgccggaag
ggcgagccggtcatcgtgccggcgagcgaggtcgagttcatggacgtctcgccgaagcag
gtgttctccgtgaacaccaacctgatccccttcctcgagcacgacgacgcgaaccgcgcg
ctgatggggtcgaacatgcaggcccaggcggtgcccctgatccgcgcggacgcgccggtg
gttgggacggggatcgaggaccgggtggtgcgcgactcgctgacctcggtctacgccgac
gtggacggcgtggtgcggtacgtggacggcgagcggatcgtgatcgagcaagagaacggg
aacgtgcgcgagtacgtgctctcgcgtttcgtgcgctcgaaccagggcaccaccttggac
cagcggccgcgcgtgaacgtggggcaacgggtgaagcggggggaccttctggcggacggg
ccttccgcggatcatgggcggctcgccctagggcagaacgtcctggtggcgatcatgccc
ttcgatgggtacaacttcgaggacgcgatcatcatcagcgaggacctcttgcgccgcgac
tactacacctcgatccacatcgaacgctacgagatcgaggcgcgggacaccaagctcggt
ccggagaagatcacccgcgacatccccaacctctccgaggcggccctgcgcgatctggat
gaggacgggatcgtgcgtgtcggcgcggaggtgaaggccggggatatcctggtgggccgc
acctccttcaagggcgagaccgagcccagccccgaggagcgcctcttgcgctcgatcttc
ggggagaaggcccgcgacgtgaaggacacctcgctgcgcgtgccgcccggcgagggcggg
attgtggtgcgcaccgtgcgcctcaagcggggcgatccgggggtggagctcaaacccggc
gtgcgtgaggtggtgcgggtctacgtcgcccaaaagcgcaagctgcaggtgggggacaag
ctcgcgaaccgtcacgggaacaagggcgtggtctccaagatcctgccgcccgaggacatg
ccgcacctgccggacggcaccccggtggatatcgtcttcaacccgctgggcgtgcccagc
cgtatgaacctcgggcagatcctcgagacgcacctgggccttgcggcgcgcgagctgggc
tttaccttcgtgaccccgatcttcgacggagcgacggaggcggagatcaaggcgttgctc
gatgaggcctttacgctgcgctgggcgcagcgcgagcagagcaacctcggcattgatgtg
cgcgagcgcgaggtgctcaaacgcgcggcgaagcaagggctcgtgcccgcggatctgccg
gaggtcgagcagctcagggagctcttcaagcaaggcaaggtcgtgctgtacgacgggcgc
accggcgagccgatcgaggggccgatcgtggtggggctgatgtacgtgatgaagctctac
cacatggtggaggataagatgcacgcgcgctccaccggcccgtactccctcatcacgcag
caacccctgggcggtaaggcccagttcggggggcagcgcttcggtgagatggaggtgtgg
gcgctcgaggcctacggcgcggcgcacaccctgcaggagatgctgaccctgaagtcggac
gatatcgagggacggaacgccgcgtacgaagcggtcgtgaaaggcggggatgtgcccgag
ccgagcgtccccgagtccttccgggtgttggtcaaggagctgcaagcgctggggctggat
gtagagacctacgacgagaacgatcggccgatcgatatcttcgagggcctggcttcccgc
aggtga
DBGET
integrated database retrieval system
