Mesomycoplasma hyorhinis GDL-1: MYM_0465
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Entry
MYM_0465 CDS
T01730
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
mhh
Mesomycoplasma hyorhinis GDL-1
Pathway
mhh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYM_0465 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhh03400
]
MYM_0465 (uvrA)
DNA repair and recombination proteins [BR:
mhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYM_0465 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYM_0465 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_29
nSTAND1
nSTAND3
ATPase
AAA_33
AAA_18
DnaJ_CXXCXGXG
AAA_22
AAA_25
AAA_21
NACHT
Viral_helicase1
NB-ARC
MMR_HSR1
cobW
MeaB
Sigma54_activat
Lactonase
FtsK_SpoIIIE
DUF881
Motif
Other DBs
NCBI-ProteinID:
AEX14222
LinkDB
All DBs
Position
complement(544687..547554)
Genome browser
AA seq
955 aa
AA seq
DB search
MKKDTHNFIYVQGAKENNLKNIDVVIPKNKLVVLTGVSGSGKSSLAFNTIYEEGKRRYVD
SLSSYARQFLGGTKKPNVDSIYGLMPTISIEQKTTHNNPRSTVSTVTEIYDYFRLLYAKI
GRAFCPKHKQEIKAWKNLEIIDYVLSFKENTKILILAPKVKKHKGDLTTILNQIRNQGFS
RIKINEEIVSVDEEITFNKNTYYDIDIVVNRLVISSSITRQIISDSIQTAFEYSKGLVKI
EALGYQTKTFSQVYECDEGDFKINTIENKLFSFNSPSGMCQSCQGIGIKLKADFNLVVLN
KKLSINQGALTYFGASPDPKSIEWQEFDTLLSYYEIDKDVPIEKLSADEFNIIKYGTDEI
LDFTLISSSGNRYRKTKSIDGILIKIENRYLETSSEEIRTWYKKFMSELVCAECKGARLN
PQALAIKINALNIYELCELPIDKIYEFIKNLKLTDFEFEVAKNILVEVEHRLKFLIDVGL
GYLSLNRKAETLSGGESQRIKLATQIGSNLTGILYVLDEPSIGLHQKDNQKLINSLKKMV
EIGNTLLVVEHDEETILSAEHIIDIGPFAGTNGGQLLSSGPLDKVLKNKDSITSQYLLGI
KKIEIPSKRRMGNGQFIVIEGAKENNLKNLKVEIPLGKFVAVTGVSGSGKSTLVNEILVN
GIVKHLTNPSQKVGKHSQIKGMFNLDKIVSISQSPIGRTPRSNPATYTSVFNDIRDIFAS
VELARARGYQKGHFSFNLAIGRCDKCQGDGSIKIEMHFLPDVYVVCDHCEGKRYKEEILE
VKYSGKSIADVLEMTVEEAIIFFAKRSKIKEKLQTLLHVGLNYIKLGQSATTLSGGEAQR
VKLATYLLKKPTGKTLYVLDEPTTGLHTYDVDNLLKVLNRIVDHGDSVLVIEHNLDVIKI
ADYIIDLGPEGGENGGYIIATGTPEAVAKNSNSYTGEYLKYILNKNKSFKKEEKV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacactcacaattttatttatgtacaaggtgcaaaagaaaataatttaaaa
aatattgatgtagtaattcctaaaaataaattagtagttttaacaggtgtttctggctca
ggaaagtcatctttagcttttaataccatttatgaagaaggaaaaagaaggtatgttgat
tcacttagctcatatgcaaggcagtttttaggtggtactaaaaaacctaatgttgattcc
atatatggattaatgccaaccatttctattgaacaaaaaacaactcacaataatccaaga
tcaacagttagtactgtgactgaaatttatgattattttcgtttgctatatgccaaaata
ggaagagctttttgtccaaaacataagcaagaaattaaagcttgaaaaaacctagaaatt
attgattatgtattgtcttttaaagaaaatacaaaaattttaattcttgctcctaaagtg
aaaaaacacaaaggagatttaacaacaattttaaaccaaataagaaatcaaggtttttcc
agaataaagataaatgaagaaattgtttctgttgatgaagaaattacttttaataaaaac
acttattatgatattgatattgtagtcaacagattagtaatttcttcttctattacaagg
caaataattagtgattcaatacaaacagcttttgaatatagtaaaggtttggttaaaatt
gaagctttaggttatcaaacaaaaactttctcacaagtttatgagtgtgatgagggtgat
tttaaaattaatactatagaaaacaaacttttttcctttaattcgccttcaggaatgtgt
caatcttgtcaaggaataggaataaaattaaaagctgattttaacttagttgttttaaat
aaaaaattaagtattaaccaaggtgcattaacttattttggtgcttcacctgatcctaaa
tctattgaatggcaagaatttgatactcttttatcttattacgaaattgacaaagacgta
cctattgaaaaactaagtgctgatgaatttaatattattaaatacggaacagatgaaatt
ttagacttcacacttatttcatcatcaggaaatagatatagaaaaacaaagtcaattgat
ggaattttaattaaaatcgaaaatagatatttagaaacaagtagcgaagaaataaggact
tgatataaaaaatttatgtcagaattagtttgtgctgaatgtaaaggagcaagattaaat
ccacaagctttagctataaaaattaatgctttaaatatttatgaactctgtgaattacca
attgataaaatttatgagtttattaaaaatctaaaacttactgattttgaatttgaagta
gctaaaaatattttagttgaagttgaacatcgacttaaatttttaattgatgttggactt
ggctatttgtctttaaatagaaaggcagaaacactctcaggcggtgaatcacaaagaata
aaattagctacacaaattggctctaatttaactggaattttgtatgttttagacgaacca
tcaatcggacttcatcaaaaagacaatcaaaaattaattaattctttaaaaaagatggtt
gaaattggtaatactttattagtagttgaacacgatgaagaaacaattttatcagctgaa
catattattgatattggaccttttgcaggaacgaatggtggtcagcttttatccagtggg
ccactagacaaagtgcttaaaaataaagattctattacttctcagtatcttttaggcatt
aaaaaaattgaaattccttcaaaaagaagaatgggtaatgggcaatttatagtaattgaa
ggtgctaaagaaaacaatttaaaaaacttaaaagtagaaataccattgggtaaatttgta
gctgtaactggagtttctggttcaggaaaatctactttagtaaatgaaattttagttaat
ggaattgtaaaacatctaacaaatccttcacaaaaggtaggaaaacattcgcaaataaaa
ggaatgtttaatcttgataaaatagtttccatttcacaatcaccaattggaagaacgcct
cgttctaatccagcaacttatacttcggtttttaacgatattcgagatatttttgcttca
gttgagttagctcgagctagaggttatcaaaaaggtcatttttcttttaatttagcaatt
ggacgttgtgataaatgtcaaggtgatggttcaattaaaattgaaatgcattttttacca
gatgtttacgttgtttgcgatcattgtgaaggtaaaagatataaagaagaaattttagaa
gtaaaatatagtggcaaatctattgcagatgttttagaaatgactgttgaagaagctata
attttctttgcaaaacgttcaaaaataaaagaaaaattacaaactttattacatgttgga
cttaactatatcaaacttggtcaatcagcaactactttatcgggtggtgaagcacaaagg
gttaaattagctacttatttacttaaaaaaccaacaggaaaaacattatatgttttagac
gaaccaactactggattgcatacttacgatgttgataatttattaaaagttttaaacaga
atagttgatcatggagacagtgttttagtcattgagcataatttagatgttattaaaata
gcagattacattattgatcttggacctgaaggtggtgaaaatggaggttacataatagca
acaggaacacctgaagctgtagctaaaaattcaaattcatatacaggcgagtatttaaaa
tatatcttaaataaaaataaaagttttaaaaaagaagaaaaagtataa
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