Microbacterium sp. CGR1: AKG07_05875
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Entry
AKG07_05875 CDS
T04046
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
mim
Microbacterium sp. CGR1
Pathway
mim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKG07_05875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mim03400
]
AKG07_05875
DNA repair and recombination proteins [BR:
mim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKG07_05875
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_2
HHH_5
UVR
DUF2586
Motif
Other DBs
NCBI-ProteinID:
AKV85900
LinkDB
All DBs
Position
complement(1215554..1217467)
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AA seq
637 aa
AA seq
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MADVLPYKPRAGEIPTNPGVYRFRDADGRVLYVGKAKNLRQRLSNYFAPLRTLHERTRRM
VTTASSVEWTVVSTDVDSLQLEYMWIKEFDPPFNVRYKDDKSYPFMAVTLGDEAPRVIVT
RNRKIPGARYFGPYPKVWAVHETIDLMVKAFPIRTCSDSSYKRAMQTGRPCFPGQIGKCG
GPCSMTVTIEEHRAMVDDFVAFMAGGDERFTRELTKRMLAASAAMDYEAAARYRDKLTAI
EAVLGKSALVLATDEDADLFGIAEDELAAAVQHFVIRGGRVRGVRAMTIEKEIDISTADL
VDQVLQRAYGDAQDVPRRIIVPTLPDDAAELEVWLRERRGKKVEIAIAQRGQRADLMRTA
TLNAQQALIRYKTRRTSDYVARTQALTDLQEALGMSEAPLRIECFDISHLGGTNVVASMV
VFEDGLPRKDQYRSFNIAETTDDTDSMYQVLRRRLAYLDRPEEIDEPASAAVPVEAGDES
EDVVVEVKRKPRFAYPPQLLLVDGGQPQVEAAARALRDAGHTEIAVCGIAKRLEEIWLPG
EDFPVILPRTSESLYLLQRLRDEAHRFAITHQRKRRKNDITSILAEVPGLGSSRIKVLLK
HFGSVTALRSAPLEAIQEVQGIGPVLAQNIHTHLSTR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcctgccgtacaagccgcgggctggtgagatccctaccaaccccggcgtg
taccgcttccgcgatgctgatggacgcgtgctgtacgtcggcaaggccaagaacctgcgc
cagcgactgtcgaactacttcgctccgctgcgcacgctccacgaacgcacgcggcggatg
gtcaccacggcgtcgtccgtcgagtggaccgtcgtctcgacggacgtggactcgcttcag
ctggagtacatgtggatcaaggagttcgatccgcccttcaacgtccgctacaaggacgac
aagtcctacccgttcatggccgtgaccctgggtgatgaggcgccgcgcgtgatcgtgacc
aggaaccgcaagattcccggtgcccgatacttcggtccttatcccaaggtctgggcggtg
cacgagacgatcgacctgatggtcaaggcattcccgatccgcacctgcagcgactccagc
tacaaacgcgcgatgcagaccggccggccgtgctttcccgggcagatcggcaagtgcggc
gggccgtgctcgatgacggtgacgatcgaggagcaccgtgccatggtcgatgacttcgtc
gccttcatggcgggcggcgatgagcgcttcacccgagagctgaccaagcggatgctggcg
gcgtcggccgcgatggattacgaggccgccgccagataccgtgacaagctcaccgcgatc
gaggccgtgctcggcaagagcgcgctcgtgctcgcgaccgacgaggatgccgacctcttc
ggcatcgcggaagacgagctggctgccgccgtgcagcacttcgtgatccgcggcgggcgc
gtccgcggtgttcgcgcgatgacgatcgagaaggagatcgacatctcgacagccgatctc
gtcgaccaggtgctgcagcgcgcgtacggcgatgcgcaggatgtgccccggcggatcatc
gtgccgacccttcccgacgacgcggccgagctcgaggtctggctgcgcgagcggcgaggc
aagaaggtcgagatcgccatcgcccaacgggggcaacgcgctgatctcatgcgcacggcg
accctcaacgcgcagcaggccctgatcaggtacaagacccgtcgtacgagcgactacgtc
gcacgaacccaggctctgaccgatctgcaggaggcgttggggatgtcggaggcgccgctt
cgcatcgagtgcttcgacatctcgcacctcggtggcacgaacgtcgtcgcctcgatggtg
gtcttcgaagacggacttccccgcaaagaccagtaccggtcgttcaacatcgccgagacc
accgacgatacggactcgatgtaccaggtgctgcgtcgtcgactcgcctacctcgatcgt
ccggaagagatcgatgagcccgcatccgcagcggtccccgtggaggcgggagacgagtcc
gaggacgtcgtcgtggaggtcaagcgcaaaccgcgcttcgcctatccgcctcagctgctg
ctggtcgacggcggacagccccaggtcgaagcggcggcacgtgcactgcgagacgccggg
cacaccgagatcgccgtgtgcggcatcgccaaacggctcgaggagatctggctcccgggg
gaggacttcccggtgatcctgccgcgcaccagcgagtcgctctacctgctgcagcggctg
agagacgaggcccaccggttcgcgatcacgcaccagcgcaaacgacgcaagaacgacatc
acgtcgatcctggccgaggtgccaggcctcggctcctcgaggatcaaggtcctcctgaag
cacttcggctccgtcaccgcgctgcgctccgcgcctctggaggcgatccaggaggtgcag
gggatcggtcctgtcctcgcacagaacatccatacgcatctctccactcgctag
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