Mycobacterium sp. JLS: Mjls_3016
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Entry
Mjls_3016 CDS
T00482
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mjl
Mycobacterium sp. JLS
Pathway
mjl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mjl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mjls_3016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjl03400
]
Mjls_3016
DNA repair and recombination proteins [BR:
mjl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mjls_3016
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mjls_3016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_5
AAA_19
DUF87
UB2H
Helicase_RecD
AIG1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABN98795
UniProt:
A0A5Q5CI49
LinkDB
All DBs
Position
complement(3151226..3153385)
Genome browser
AA seq
719 aa
AA seq
DB search
MAFATEHPVLAHSEYRPVEAMVRTGNRFEVVSPYQPAGDQPAAIDELERRIRAGERDVVL
LGATGTGKSATTAWLIERLQRPTLLMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYMDR
SVELKVGDEVPRDALLRLLVDVQYARNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEYFG
DEVEALYYMHPLTGDVVRRVDSLRVFPATHYVAGPERMAQAISSIEKELEERLAELEGQG
KLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLLVID
ESHVTVPQIGGMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFASRIGQTVYLSATPGP
YEMSQSGGEFVEQVIRPTGLVDPQVIVKPTKGQIDDLIGEIRKRTELDERVLVTTLTKKM
AEDLTDYLLELGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTRSLIQTIGRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAY
NEERGIDPKPLRKKIADILDQVYREADDTETVEVGGSGRNASRGRRAQGEPGRAVSAGIV
EGRDTANMPRAELADLIKDLTEQMMTAARDLQFELAARIRDEIQDLKKELRGMDAAGLK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgcgaccgaacacccagtgctcgcacactccgagtaccgccctgtcgaggcg
atggtgcggaccggcaaccggttcgaggtggtcagcccctaccagcccgccggtgatcag
cccgcggcgatcgacgagctggagcggcgcatcagggcgggggagcgtgacgtcgtgctc
ctcggcgcgaccggcaccggcaagtcggcgaccaccgcatggctgatcgaacggctccaa
cggccgacgttgctgatggcgccgaacaagacgctcgccgcccagctcgcgaacgagctg
cgagagatgttgccgcacaacgccgtcgagtacttcgtgtcgtactacgactactaccag
cccgaggcgtacatcgcccagacggacacctacatcgaaaaggacagctccatcaacgac
gatgtggagcggttacggcactccgcgacgtcgagtctgctctcgcggcgtgacgtggtc
gtggtggcgtcggtgtcgtgcatctacggtctgggcacgccgcagtcctacatggaccgg
tcggtggagctgaaggtgggcgacgaggtgccccgcgacgcactgctgcgactgctggta
gacgtgcagtacgcccgcaacgacatggcgttcacccgcgggacgttccgcgtacgcggt
gacaccgtcgagatcatcccctcgtacgaggaactcgcggtgcgcatcgagtacttcggc
gacgaggtcgaggcgctgtactacatgcacccgttgaccggtgatgtcgtccgccgggtc
gactctctgcgggtcttccccgcgacgcattacgtcgccgggccggagcggatggcgcag
gcgatctccagcatcgagaaggaactcgaggagcggttggccgagctcgaaggccagggc
aagctgctggaggcgcagcggctgcggatgcgcaccaattacgacatcgagatgatgcgg
caggtcgggttctgctccggcatcgagaactattcacgtcacatcgacggacgcggtccc
ggcaccgcgcccgcgacgctcatcgactacttcccggaggacttcctgctggtcatcgac
gagtcccacgtgaccgtgccgcagatcggcggtatgtacgaaggggacatgtcgaggaag
cgcaatctggtcgacttcggtttccggttgccgtcggcagtcgacaaccgcccgctgacg
tgggaggagttcgcgtcacggatcgggcagaccgtgtacctgtcggcgacgccgggccca
tacgagatgagccagtccggcggcgagttcgtcgaacaggtcatccgcccgacggggctg
gtcgatccgcaggtgatcgtcaaacccaccaaggggcagatcgacgatctgatcggggag
atccgcaagcgcaccgaactcgacgagcgggtgctggtcaccacgttgaccaagaagatg
gccgaggatctcaccgactatctgctcgaattgggcatcagggtgcgctacctgcactcc
gaagtcgacaccctgcgccgcgtcgagttgctgcgccagctccggctcggcgagtacgac
gtgctggtgggtatcaacctgctgcgcgaaggtctggacctgccggaggtgtcgctggtg
gcgatcctcgacgccgacaaggaggggttcctgcggtcgacgcgcagcctcatccagacc
atcggccgtgccgcccgcaacgtgtccggtgaggtccacatgtacgcggacaagatcacc
gactcgatgcgtgaggcgatcgacgagaccgaacgccgccgcgccaagcagatcgcctac
aacgaggagcggggcatcgaccccaaacccctgcgcaagaagatcgccgacatcctcgac
caggtctaccgcgaggccgacgacaccgagaccgtcgaagtgggcggttcgggccgcaac
gcgtcccgcggccggcgcgcccagggtgagccgggccgcgcggtcagcgcaggcatcgtc
gagggacgcgacaccgctaacatgccgcgtgccgaactggcggatctgatcaaggatctg
accgagcagatgatgaccgccgcccgcgacctgcagttcgaactggccgcccgcatccgc
gacgagatccaggacctcaagaaggaactgcgcggtatggacgccgcgggcctgaagtga
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