Mycobacterium tuberculosis variant microti: RN08_4039
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Entry
RN08_4039 CDS
T04291
Name
(GenBank) dipeptide ABC transporter ATP-binding protein DppD
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic01501
beta-Lactam resistance
mmic02010
ABC transporters
mmic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RN08_4039
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RN08_4039
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RN08_4039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmic02000
]
RN08_4039
Transporters [BR:
mmic02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RN08_4039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
DUF87
AAA_29
SMC_N
nSTAND1
AAA_16
nSTAND3
NACHT
Mg_chelatase
RsgA_GTPase
Sigma54_activat
Zeta_toxin
AAA_24
CbiA
NB-ARC
AAA_5
ATPase
PRK
AIG1
Motif
Other DBs
NCBI-ProteinID:
AMC61466
LinkDB
All DBs
Position
complement(4074463..4076121)
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AA seq
552 aa
AA seq
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MAGMSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILG
LLPAGGRITAGRVVFDGRDITGADAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEA
LRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQRALIAIGLAGRPRLLIA
DEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVVRRGVVVESG
AAQSILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKIYRESRG
APWRRVESRAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDV
GALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELVD
QVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQILDLLAD
LQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLLQAIP
GAPSAPRKVGNL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatgagcgtcccagcagcgccgctgttgtcggtggagggcctggaagttacg
ttcggcaccgatgctcccgccgtgtgtggggtggatctggccgtccggagcggtcaaacc
gtcgccgtggtgggtgagtccgggtcgggcaaatccacgacggccgcggcgattcttggg
ttgcttccggctggtggacggatcaccgctggacgcgttgtgttcgacgggcgcgacatc
accggggccgatgccaagcggctacggtcgataaggggacgggagatcggctatgttccc
caggatccgatgaccaacctcaatccggtttggaaggtcggctttcaggtcacagaagcg
ttgcgggccaataccgacggtcgcgcagcacgacgacgggcggtggagctactcgctgag
gcgggcctgccggatccggcgaagcaagccggacgctacccgcatcagctgtccggcggc
atgtgccagcgggcgttgattgcgatcggcttggcgggcaggccgcggctgctgatcgcc
gatgagccgacgtccgcgttggatgtcaccgtgcagcggcaggtgctcgatcatcttcag
ggactcaccgacgaactaggcaccgcgctgctactgatcacccacgatctggcgttggcc
gcgcagcgggccgaggctgtcgtcgtcgtcgtccgtcgtggagtggtggtggaatccggt
gcggcgcagtcaatcctgcaaagccctcagcacgagtacacccggcgcctggtggccgcg
gctccatcgctgacggcgcgcagcagacgtccgccggaatcccggtcacgggcaaccacg
caggccggcgacattctcgtcgtctcggagctgaccaagatttaccgggagtcccgcggc
gcaccgtggcggcgggtggagtctcgcgccgtcgacggagtgtcattccggctaccgcgg
gcgagcaccctggcaatcgtcggcgaatccgggtcaggcaagtcgacgctagcgcggatg
gtgcttgggctgctccaacctacctcgggcacggtcgttttcgacggcacctacgacgtc
ggcgcgctggcccgggaccaggtgctggcctttcgccgccgggtccagccggtgttccaa
aacccatacagcagcctggatcccatgtactcggtgtttcgcgccatcgaggaaccgtta
cgcgtccatcacgtcggtgaccgccggcagcggcaaagggcggtgcgtgagctggtcgat
caggtggcgctgccgtcgtcgatactgggccggcggccccgtgagctgtcgggtggtcag
cggcagcgggtagcgatcgcgcgtgcgctggcgctgcgcccggaggtattggtgtgcgac
gaagcggtgtcggcgctcgacgtattggtgcaggcacagatcctggatctgctggccgat
ctgcaggccgacctgggtttgacgtatttgttcatcagccatgatctggcggtgatccgg
cagattgccgacgacgtcctggtcatgcgggccggccgggtggtggagcacgcctctacc
gaggaggtgttcagccggccccgccacgagtacacccgccagttgcttcaggccattccc
ggtgccccctcagctccccgaaaggttggcaacctgtga
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