KEGG   Mus musculus (house mouse): 100384868
Entry
100384868         CDS       T01002                                 
Symbol
Pcdha4b, Cnr1, Gm37013, Pcdha4, Pcdha4-g
Name
(RefSeq) protocadherin alpha 4B
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    100384868 (Pcdha4b)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    100384868 (Pcdha4b)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    100384868 (Pcdha4b)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   100384868 (Pcdha4b)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_tail Cadherin_3 Cadherin_C_2 SRTM1
Other DBs
NCBI-GeneID: 100384868
NCBI-ProteinID: NP_001167625
MGI: 5610241
Ensembl: ENSMUSG00000103458
UniProt: O88689 Q8K492
Structure
LinkDB
Position
18:37085701..37974926
AA seq 919 aa
MEFSWGSGQESQRLLLSFLLLAIWEAGNSQIHYSIPEEAKHGTFVGRIAQDLGLELTELV
PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVRDINDNPPRFPTTQKNLFIAESRPLDTWFPLEGASDADIGINAVLTYRLSPNDYFSL
EKPSNDERVKGLGLVLRKSLDREETPEIILVLTVTDGGKPELTGSVQLLITVLDANDNAP
VFDRSLYTVKLPENVPNGTLVVKVNASDLDEGVNGDIMYSFSTDISPNVKYKFHIDPVSG
EIIVKGYIDFEECKSYEILIEGIDKGQLPLSGHCKVIVQVEDINDNVPELEFKSLSLPIR
ENSPVGTVIALISVSDRDTGVNGQVTCSLTSHVPFKLVSTFKNYYSLVLDSALDRETTAD
YKVVVTARDGGSPSLWATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAM
DADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLRFQVSARDA
GVPALGSNVTLQVFVLDENDNAPTLLEPEAGVSGGIVSRLVSRSVGAGHVVAKVRAVDAD
SGYNAWLSYELQSSEGNSRSLFRVGLYTGEISTTRILDEADSPRQRLLVLVKDHGDPAMI
VTATVLVSLVENGPVPKAPSRVSTSVTHSEASLVDVNVYLIIAICAVSSLLVLTLLLYTA
LRCSTVPSESVCGPPKPVMVCSSAVGSWSYSQQRRQRVCSGEYPPKTDLMAFSPSLSDSR
DREDQLQSAEDSSGKQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMIL
ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG
KAPAGGNGNKKKSGKKEKK
NT seq 2760 nt   +upstreamnt  +downstreamnt
atggaattttcctggggaagtggccaggaatcccagcgcttgcttctttcttttctgctt
cttgcaatctgggaggcagggaacagccagatccactactccatccctgaggaggccaaa
cacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctgacggagctggtg
ccccgcctgttcagagtggcgtccaaggaccgcggagaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagcgcg
gagtgcagcatccacctggaggtgatcgtggacaggccgttgcaggttttccacgtggag
gtggaggtgagggacattaacgacaaccctcccaggttcccaacaacacaaaagaatctg
ttcattgcagaatcaaggccacttgacacttggtttccactagagggcgcttcagacgca
gatatcggaatcaatgctgtactgacttacagactgagtccaaatgattacttttctttg
gaaaaaccatccaacgacgaacgggtaaaaggtcttggacttgtattacggaaatcttta
gaccgggaggaaactccagagataattttagtgcttactgtcacggacggaggaaagcca
gagctgaccggcagtgttcagttactcatcactgtgctggatgccaatgataatgctcca
gtttttgacagatctctgtataccgtgaaattaccagaaaacgttccaaatgggacattg
gtagtcaaagtcaatgcctcagatttagacgaaggggtaaatggggatattatgtactca
ttttctacagatatttcaccaaatgtgaaatacaaattccacatagaccctgttagcgga
gagattattgtaaagggatacattgattttgaagaatgcaaatcctatgaaattctcata
gagggaattgacaagggacaacttccactctctgggcactgtaaagtcattgtacaagtt
gaagacatcaacgataatgttccagaattggaattcaaatctctatcacttccaatacga
gagaattctccagtgggcactgtcatcgcactcattagtgtgtctgatcgggacacgggt
gtcaacgggcaggtgacctgctccctgacaagtcatgtccccttcaagttggtgtccaca
ttcaagaattactattcgctcgtgctggacagcgccctggacagagagacaacagcggac
tataaggtggtggtgacagcgcgggatgggggctctccctcgctgtgggccacggctagc
gtgtctgttgaggttgctgacgtgaacgacaatgcacctgtgttcgcgcagcccgaatac
acggtgttcgtgaaggagaacaacccgcctggtgcgcacatcttcacggtgtcagcgatg
gatgcggacgcacaggagaacgcgctggtgtcctactcgctggtggagcggagggtgggc
gagcgcttgctgtcgagctatgtgtctgtgcacgcggagagcggcaaggtgttcgcgctg
cagcctctggaccatgaggagctggagctgctgcggttccaggtgagcgcgcgggatgct
ggtgtacctgccctgggcagcaatgtgactctgcaggtgtttgtgctggacgagaatgac
aacgcgcccacactgctggaacctgaggcaggagtctctggtggaatcgtgagccggttg
gtgtccagatcagtgggtgcaggccatgtggtggctaaggtgcgcgcggtggatgcagac
tctggctataatgcatggctctcttatgagctgcaatcgtcagaaggcaattcccgtagc
cttttccgcgtaggtttgtatacgggcgagattagtactacgcgcatactggatgaagca
gattcgccacgtcagcgccttctggtgctggtgaaggaccatggtgacccagcaatgatt
gttaccgccacagtgttggtgtctctggtagagaatggcccggtaccaaaggctccatcg
cgagtatccacgagtgtcacacactctgaggcgtcactggtggatgtcaacgtgtacctg
atcattgccatctgtgcagtgtccagcctgctagtgctcacgctgctgctgtacacagcg
ctgcgctgttccactgtccccagtgagagcgtgtgcgggcctccaaaaccggtaatggtg
tgctccagtgcagtggggagctggtcatactcccaacaaaggaggcaaagggtgtgctct
ggggagtacccacctaagaccgacctcatggccttcagccccagtttatctgattcaagg
gacagagaggatcaattgcagtctgcagaggattcctctggaaagcaagccccgcccaac
actgactggcgtttctctcaagcccagagacccggcacgagcggatcccaaaatggtgat
gaaactggcacctggcccaacaaccagtttgatacagagatgctgcaagccatgatcttg
gcctctgccagcgaagctgctgatgggagctctaccctgggagggggcgctggcaccatg
ggtctgagcgctcgatacggaccccagtttaccctgcagcacgtgcctgactaccgccag
aacgtgtacatccctggcagcaatgccacgctgaccaatgccgctggcaaacgagatggc
aaggctccagcaggtggtaatggcaacaagaagaaatcgggcaagaaagagaagaagtaa

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