Mus musculus (house mouse): 140476 Help Entry 140476            CDS       T01002                                  Symbol Strc, DFNB16 Name (RefSeq) stereocilin   KO K24636   stereocilin Organism mmu  Mus musculus (house mouse) Brite KEGG Orthology (KO) [BR:mmu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:mmu03037]     140476 (Strc) Cilium and associated proteins [BR:mmu03037]  Other cilia and associated proteins   Stereociliary proteins    140476 (Strc) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Stereocilin Motif Other DBs NCBI-GeneID:  140476 NCBI-ProteinID:  NP_536707 MGI:  2153816 Ensembl:  ENSMUSG00000033498 UniProt:  Q8VIM6 LinkDB All DBs Position 2:complement(121193729..121211851) Genome browser AA seq 1809 aa AA seqDB search MALSLQPQLLLLLSLLPQEVTSAPTGPQSLDAGLSLLKSFVATLDQAPQRSLSQSRFSAF LANISSSFQLGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDVLALLGQ EQTPRDFLVHQAGVLGGLVEALLGALVPGGPPAPTRPPCTRDGPSDCVLAADWLPSLMLL LEGTRWQALVQLQPSVDPTNATGLDGREPAPHFLQGLLGLLTPAGELGSEEALWGGLLRT VGAPLYAAFQEGLLRVTHSLQDEVFSIMGQPEPDASGQCQGGNLQQLLLWGMRNNLSWDA RALGFLSGSPPPPPALLHCLSRGVPLPRASQPAAHISPRQRRAISVEALCENHSGPEPPY SISNFSIYLLCQHIKPATPRPPPTTPRPPPTTPQPPPTTTQPIPDTTQPPPVTPRPPPTT PQPPPSTAVICQTAVWYAVSWAPGARGWLQACHDQFPDQFLDMICGNLSFSALSGPSRPL VKQLCAGLLPPPTSCPPGLIPVPLTPEIFWGCFLENETLWAERLCVEDSLQAVPPRNQAW VQHVCRGPTLDATDFPPCRVGPCGERCPDGGSFLLMVCANDTLYEALVPFWAWLAGQCRI SRGGNDTCFLEGMLGPLLPSLPPLGPSPLCLAPGPFLLGMLSQLPRCQSSVPALAHPTRL HYLLRLLTFLLGPGTGGAETQGMLGQALLLSSLPDNCSFWDAFRPEGRRSVLRTVGEYLQ REEPTPPGLDSSLSLGSGMSKMELLSCFSPVLWDLLQREKSVWALRTLVKAYLRMPPEDL QQLVLSAEMEAAQGFLTLMLRSWAKLKVQPSEEQAMGRLTALLLQRYPRLTSQLFIDMSP LIPFLAVPDLMRFPPSLLANDSVLAAIRDHSSGMKPEQKEALAKRLLAPELFGEVPDWPQ ELLWAALPLLPHLPLESFLQLSPHQIQALEDSWPVADLGPGHARHVLRSLVNQSMEDGEE QVLRLGSLACFLSPEELQSLVPLSDPMGPVEQGLLECAANGTLSPEGRVAYELLGVLRSS GGTVLSPRELRVWAPLFPQLGLRFLQELSETQLRAMLPALQGASVTPAQAVLLFGRLLPK HDLSLEELCSLHPLLPGLSPQTLQAIPKRVLVGACSCLGPELSRLSACQIAALLQTFRVK DGVKNMGAAGAGSAVCIPGQPTTWPDCLLPLLPLKLLQLDAAALLANRRLYRQLPWSEQQ AQFLWKKMQVPTNLSLRNLQALGNLAGGMTCEFLQQISSMVDFLDVVHMLYQLPTGVRES LRACIWTELQRRMTMPEPELTTLGPELSELDTKLLLDLPIQLMDRLSNDSIMLVVEMVQG APEQLLALTPLHQTALAERALKNLAPKETPISKEVLETLGPLVGFLGIESTRRIPLPILL SHLSQLQGFCLGETFATELGWLLLQEPVLGKPELWSQDEIEQAGRLVFTLSAEAISSIPR EALGPETLERLLGKHQSWEQSRVGHLCGESQLAHKKAALVAGIVHPAAEGLQEPVPNCAD IRGTFPAAWSATQISEMELSDFEDCLSLFAGDPGLGPEELRAAMGKAKQLWGPPRGFRPE QILQLGRLLIGLGERELQELTLVDWGVLSSLGQIDGWSSMQLRAVVSSFLRQSGRHVSHL DFIYLTALGYTVCGLRPEELQHISSWEFSQAALFLGSLHLPCSEEQLEVLAYLLVLPGGF GPVSNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGLTPLAISVIPAPKFAVVFNPIQLS SLTRGQAVAVTPEQLAYLSPEQRRAVAWAQHEGKEIPEQLGRNSAWGLYDWFQASWALAL PVSIFGHLL NT seq 5430 nt NT seq  +upstreamnt  +downstreamnt atggctctgagcctccagccccagctgctccttctcctgtcgctcctgccgcaggaagtg acttcagcccctactgggcctcagtctttggatgctggtctctcccttctgaagtcattc gtagccactctggaccaagctcctcagcgttccctcagccagtcacggttctctgcgttc ctggccaacatttcttcatccttccagcttgggaggatgggggagggaccggtgggagag cccccacctctccagccccctgcacttcgacttcatgatttcctcgtgacactgagaggt agcccagactgggagccaatgctagggcttctgggagatgtgctggcactcctgggacag gaacagactccccgggactttttggtgcaccaggcaggtgtactgggtggacttgtagag gcattgttgggagcgttagttcctggaggcccccctgcccccactcgacccccatgcacc cgtgatggcccttctgactgtgtcctggctgctgattggttgccttctctgatgttgtta ttagagggtacacgctggcaggccctggtgcagttgcagcccagtgtggacccaaccaat gccacaggtcttgatggtagagagccagctcctcactttttacagggtctgctgggcttg cttaccccagcaggagagttgggctctgaggaggctctttggggtggtctgctgcgcaca gtgggggcccccctctatgctgccttccaggaggggctactgcgagtcactcattctctg caagatgaggtcttttctattatgggacagccagagcctgatgccagtgggcagtgccag ggaggcaaccttcaacagctgcttttatggggcatgcggaacaacctttcttgggacgcc cgagcactgggttttctatctggatcaccacctccaccccctgctctcctgcactgcctg agcagaggtgtgcctctgcccagggcttcccagcctgcggctcacatcagccctcgacag cggcgagccatctctgtggaggccctctgcgagaaccactcaggcccagagccaccctac agcatctccaacttctccatctacttgctctgccagcacatcaagcctgccaccccgcgg ccccctcctaccaccccacggcctcctcctaccaccccacagccccctcctaccactaca cagcccattcctgacactacacagccccctcctgtcaccccaaggcctcctcctaccacc ccacaaccccctcctagcacagctgtcatctgccagacagctgtatggtacgcagtctcg tgggcaccaggtgcccgaggttggctccaagcctgccatgatcagtttcctgatcaattt ctggatatgatctgcggcaacctctcattttcagccctgtctggccccagtcgtcctttg gtaaagcagctctgtgctggcttgctcccaccccccactagctgtccaccaggcctgatc cctgtgcccctcaccccagaaatattctggggctgtttcctggagaatgagacactgtgg gctgaacggttgtgtgtggaggacagtctgcaggctgtgcccccgaggaaccaggcttgg gttcagcatgtgtgtcggggccccaccttggacgccactgattttccaccgtgccgcgtt ggaccctgtggggaacgctgcccagatgggggcagcttcctgctcatggtctgtgccaat gacactctgtatgaagccttggttcccttctgggcttggctagcaggccaatgcagaatt agtcgtggaggaaatgatacttgctttctagaaggcatgctgggccccttgttgccctct ctgccccctctgggaccatccccactctgtctggctcctggtccttttctgcttggcatg ttatcccagttgccacgctgtcagtcctccgtgccagccctcgcccaccccacgcgccta cattacctcctgcgcctactgaccttccttctgggtccagggactgggggtgccgagacg caggggatgttaggtcaagccctgctgctctctagtctcccagacaactgttcattctgg gatgccttccgcccagagggccggagaagtgtactgaggacagtcggagagtacttgcag cgggaagagccaaccccaccaggcttagactcctccctcagcctcggctctggtatgagc aagatggagcttctgtcctgcttcagtcctgtactgtgggatctactccagagagagaag agcgtttgggccctgaggaccctggtgaaggcctacctgcgcatgcctccagaagacctt cagcagcttgtgctttcagcagagatggaggctgcacagggcttcctgacgctcatgctt cgttcctgggctaagctgaaggttcaaccatccgaggagcaggccatgggccgcctgaca gccttgctgctccagcggtacccacgcctcacctcccaactctttatcgacatgtcaccg ctcatccccttcctggctgtccctgacctcatgcgcttcccaccgtcccttttggccaac gacagtgtcctggctgccatcagggatcacagctcaggaatgaagcctgaacagaaggag gccctggcaaaacgactgctggcccctgagctgtttggagaagtgcctgattggccccag gagctgctgtgggcagccctgcctctgcttccccatctgcctctggagagctttctccag ctcagccctcaccagatccaggccctggaggatagctggccagtagcagatcttgggccg ggacacgcccgacatgtgcttcgtagcctagtaaaccagagcatggaggatggggaggag caggtgctcaggcttgggtccctcgcctgtttcctgagtcctgaggagctacagagtctg gtgcccttgagtgatccaatggggcctgtagaacagggtctgctggaatgtgcggccaat gggaccctcagcccagaaggacgggtggcatatgaacttctgggagtgttgcgttcatct ggaggaactgtcttaagcccccgagagctgagggtctgggcacctctctttccccagctg ggcctccgcttcctgcaggagctctcagagacccagcttagagccatgcttcctgcccta cagggagccagtgtcacacctgcccaggctgttctgttgtttggaaggctccttcctaag catgatctgtccctggaggaactctgctccctgcaccctctcctgccaggtctcagcccc cagacactccaggccatccctaagagagttctggttggtgcttgttcctgcctgggccct gaactgtcaaggctttcagcttgccagattgcagctctgctgcagacctttcgggtaaaa gatggtgttaaaaatatgggtgcagcaggtgccggctcagccgtgtgcattcctgggcag cccaccacttggccagactgcctgcttcccctgctcccattaaagctgctacagctggac gctgcagctcttctggcaaaccgaagactctatcggcagctgccttggtctgagcaacag gcacagtttctctggaagaaaatgcaagtgcctaccaacctgagcctgaggaatctgcag gctctgggcaacttggcaggaggcatgacctgcgagtttctgcagcagatcagctcaatg gttgactttcttgatgtggtacacatgctctaccagctgcccactggtgttcgagagagc ctgcgggcctgtatctggacagagctacagcggaggatgacaatgccagagccagagctg accaccctagggccagaactgagtgaacttgacacaaagctactcctggacttgccgatc cagctgatggacagattgtccaatgattccattatgttggtggtggagatggtccaaggc gctccagagcagctgctggcactgaccccactccaccagacagccttggcagagcgagca cttaaaaacctggctccaaaggagaccccaatctccaaagaagtgctggagacactgggc cccttggttggattcctgggaatagagagcacgcgacggatccctttacccattctactg tctcatctcagtcagctgcagggcttctgcctaggagagacatttgccacagagctggga tggctgctgttgcaggagcctgttcttggaaaaccagaattgtggagccaggatgaaata gagcaagctggacgcctagtattcactctgtctgctgaggctatttcctcgatccccagg gaggctttgggcccagagacactggagaggcttctgggaaagcatcaaagctgggagcag agcagagtgggccatctgtgtggggagtcacagcttgcccacaagaaagcagctctggta gctgggattgtgcatccagctgctgagggtctccaagagcctgtaccaaactgtgcagac atacggggaaccttcccagcggcctggtctgcgacacaaatctcagagatggaactctca gactttgaagactgcctgtcactatttgctggagatccaggacttggtcctgaggaacta cgggcagccatgggcaaggccaagcagttgtggggtccccctcgaggattccgtcctgag cagatcttgcagctgggccgtctcctgataggtctaggagaacgggaactgcaggagctt accttggtggactggggtgtgctgagcagcctggggcaaatagatggctggagttccatg cagctccgagccgtggtctccagtttcctaaggcagagtggtcggcatgtgagccacctg gacttcatttatctgacagcactgggttacacagtctgtggattgcgaccagaggagtta cagcacatcagcagttgggagtttagccaagcagctctcttcctgggtagcttgcatctc ccgtgctctgaggaacagctggaagttctggcctatctccttgtgttgcctggtggcttt ggcccagtcagtaactgggggcctgagatcttcactgaaattggcacaatagcagctggc atcccagacctggctctttcagcattactgcggggacagatccaaggcctgactcctctt gccatttctgtcattcctgctcccaagtttgcagtggtcttcaaccccatccagttatct agtctcaccaggggtcaggccgtagctgttactcctgaacagctggcctatctgagtcct gagcagcggcgagcagttgcatgggcccaacacgaagggaaggagatcccagagcagctg ggtcgaaactcagcctggggtctctacgactggttccaagcctcctgggccctggcattg cccgtcagcatttttggccacctattatga

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