Monoraphidium neglectum: MNEG_9876
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Entry
MNEG_9876 CDS
T05028
Name
(RefSeq) RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mng
Monoraphidium neglectum
Pathway
mng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MNEG_9876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mng03041
]
MNEG_9876
Enzymes [BR:
mng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MNEG_9876
Spliceosome [BR:
mng03041
]
Complex C
Other components
Step II factors
MNEG_9876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
SLFN-g3_helicase
T2SSE
AAA_7
ATPase
Motif
Other DBs
NCBI-GeneID:
25742751
NCBI-ProteinID:
XP_013897106
UniProt:
A0A0D2MB23
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MQVRANKVLIVVGETGSGKTTQIPQFLLQSGLADISGGGGGKGGWRGGRDGGGGGMIACT
QPRRVAAVTVARRVAEEMGVQLGQKVGYSIRFDDCTSPSTRIKYMTDGMLLRECLLDPLL
NKYKVVIVDEAHERTVSTDVLLGLLKGVAARRGDDFRLLVMSATLDAEAFSKYFGGARAV
WVQGRQHPVAVMCTTHPEDNYLDAALNAVLQVHCEEGPGDILVFLTGQEEIEGLERLLMD
RAAALPDGAAGRGGGPEELLVLPIYAALPPEQQMRVFDPAPAGSRKAILATNIAETSITI
PGVRYVVDTGFVKARGYHAKLGADSLQVVPVSQAQARQRSGRAGREGPGKAYRLYTLESF
KALAPTTPPEILRSNLASTVLQLKALGVEDVVGFDFMDKPPRAAVVRRALSDVCGAFCNG
GSGAVITVPFAPARPPLPV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcgtgccaacaaggtcctgatcgtggttggggagacaggatcggggaagacc
actcagattccacagttcctgctgcaaagcggcctcgctgacatcagcggcggcggcggc
ggcaagggcggctggcgcggcggcagggacggtggcggcggcgggatgatcgcgtgcacg
cagccgcggcgcgtggcggcagtaacagtagcgcggcgggttgcggaggagatgggggtg
cagctggggcagaaggtcggctactccattcgcttcgacgactgcacttctccctccacg
cgaatcaagtacatgacagatggcatgctgctgagggagtgcctgctggaccccctgctc
aacaaatacaaggtcgtcatcgtggacgaggctcacgagaggaccgtgtcaaccgacgta
ctgctgggcctgctcaagggggtggccgcgcggcgaggggacgacttccggctgttggta
atgagcgccacactcgacgcagaggcgttcagcaagtactttggcggcgcgcgggcggtg
tgggtccaggggcggcagcacccggtggccgtcatgtgcacgactcatccggaggacaat
tacctcgacgcagctttgaacgcggtgctgcaggtgcactgtgaggaggggcccggcgac
atcctcgtgttcttgacgggccaggaggagatcgagggcctggagcggctgctgatggac
cgcgccgcggcgctgccggatggtgccgcggggcgcgggggcggccccgaagagctcttg
gtgctgcccatctacgccgccctgccgccggagcagcagatgcgggtgtttgacccggcg
cccgctggcagccgcaaggcaatcctggcgaccaacattgcggagacgtccatcactatt
ccaggggtgcgctatgtggtggatactgggtttgtcaaggcccgggggtaccacgcaaag
ctgggggcggactcgcttcaggtcgtgccggtctcccaggcgcaggcgcggcagcggagc
ggccgcgcgggccgcgaggggcccggcaaggcgtaccgcctgtacaccctggagtccttc
aaggccctcgcgcccaccacgccgccggagatactgcgcagcaacctcgcgagcacggtg
ctgcagctcaaggccctgggcgtggaggatgtggtgggctttgatttcatggacaagccg
cccagggcggcggtggtcaggcgagcgctcagcgacgtgtgcggtgctttctgcaacggc
ggctcaggcgcagtgatcacggtgccgtttgctccggcccgaccgcctttacctgtgtag
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integrated database retrieval system
