Candidatus Methylomirabilis oxygeniifera: DAMO_3104
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Entry
DAMO_3104 CDS
T02155
Name
(GenBank) putative tRNA-dihydrouridine synthase (Nitrogen regulation protein nifR3)
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mox03016
]
DAMO_3104
Transfer RNA biogenesis [BR:
mox03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
DAMO_3104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
NanE
Oxidored_FMN
IMPDH
Motif
Other DBs
NCBI-ProteinID:
CBE70177
UniProt:
D5MMQ5
LinkDB
All DBs
Position
2688401..2689411
Genome browser
AA seq
336 aa
AA seq
DB search
MRIGPHQLQNNLIVAPMAGVTDRPFRMLCRSMGAGMAVSEMVASNSLLYGSEKTKRRANH
EGETDPISVQLLGADPKMLAQAARYNVDAGAQIIDINMGCPAKKICNVMAGSALLQNEAL
VAQILETVVAAVSVPVTLKIRTGWDTQNRNAVRIAQIAEISGIQALAIHGRTRACAYTGE
AEYDTIAAVKASVKIPIIANGDITTPEKAHYVVQHTGADAVMIGRAAQGRPWLFREIAHF
LDTGLHLPAPQVVEIQRVLLNHLHGLYDLYGEHTGLRVARKHISWYTKGLAGSAQFRRCM
NQLESIAEQLKVVNDFFDGQLQRGERLHYAEEQIGQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggtccccaccagctccaaaataacctgattgtcgcccccatggctggcgtg
acggatcggcctttccgcatgttgtgcaggagcatgggcgcaggcatggcggttagcgaa
atggtggcctccaactcgctgctgtatggttcggaaaaaaccaaacggcgcgccaatcac
gagggcgaaaccgatccgatctcggtgcagctcctcggcgccgacccgaaaatgctggca
caggccgcccgttacaacgtggatgcgggggcgcaaatcatagacatcaatatgggctgc
ccggcgaaaaaaatctgcaatgtgatggccggttccgcgctgttgcagaatgaggcgctg
gtggcgcaaatacttgaaacggtagtggcggcggtgagcgtaccggtcaccttgaaaatc
cgcaccggatgggatacacaaaaccgcaatgcggtgcgcatcgcgcagatcgccgaaatc
agcggtatccaggcgcttgccattcatggccgcacgcgcgcctgtgcctacaccggcgag
gcggaatatgacaccatcgcggcagtgaaagccagcgtgaagattcccatcatcgccaac
ggtgacatcactaccccggaaaaagcccactatgttgtgcagcacaccggtgcagatgcc
gtgatgataggccgcgccgcgcagggccgtccgtggctgttccgcgaaatcgcacatttt
cttgataccggtctacacctgcccgcgccacaagtggttgaaatccagcgcgtgctgctc
aatcatctgcacggcctgtacgatttgtacggcgaacataccggcttgcgtgtggcgcgt
aaacacatctcctggtacaccaaagggctggccggttcggcgcagttccgtcgctgcatg
aatcaactggaaagcattgcggaacaattgaaggtagtaaatgatttttttgatggtcag
ttgcagcgcggggaacgcctgcactatgccgaggaacagattggacaatag
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