Microbacterium paludicola: BO218_15620
Help
Entry
BO218_15620 CDS
T04601
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpal
Microbacterium paludicola
Pathway
mpal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BO218_15620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpal03021
]
BO218_15620
03019 Messenger RNA biogenesis [BR:
mpal03019
]
BO218_15620
Transcription machinery [BR:
mpal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BO218_15620
Messenger RNA biogenesis [BR:
mpal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BO218_15620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APF35460
LinkDB
All DBs
Position
3301373..3303529
Genome browser
AA seq
718 aa
AA seq
DB search
MESNSENLTIDETVDAPTEEAAEQQDAVVETPTEAAAPAEETRAEAAASDASDVAAAEAD
APAEAVETAEAAAPAEAAAPAEPAAPAEKPAKAPRKRAPRRAKSTDVPATDEAPAAETAA
SDAPAETSASDAEAPAADVVSAEAASTADETAPAADAAEATADAETTPAETTEAPKKPAR
GRGRGRNAKKDAETEAAPGTDAPAESADAPAAEGASETPAEQAPDAEASSDDSSKTESGE
GDGESSGRSRSRSRSRNRNRNKDNAQGNQGQAGQNQGGNQNQGAGQNQGGNNGPDDDDAP
GQSGRGRQRNKRRGQGGGGDEFETEISEDDVLIPIAGVLDVLDNYAFVRTTGYLPGPQDV
YVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDSINGLSVEDAAGRVEFG
KLTPLYPQERLRLETGPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIAGAIAQ
NNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELG
RDVVVLLDSITRLGRAYNLSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILA
TALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSSDEV
KITWKLRRALAGLDQQHALGVILDKLKETQSNVEFLVQMQKSIPAPTTHSGGHDNSIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccaactccgagaacctgacgatcgacgagaccgtcgacgccccgaccgaggaa
gcggccgagcagcaggatgccgtcgtggagacgcccaccgaggcggctgcccccgctgag
gagacgcgcgccgaagccgcggcatctgacgcctcggacgttgctgctgccgaggcggac
gccccggcggaggccgtggagaccgccgaggccgcggcgcccgccgaggccgcagcgccc
gcggagcccgcagcgcccgcggagaagccggcgaaggcgccgcgcaaacgcgcgccccgc
cgcgccaagagcaccgatgtcccggccaccgacgaggcgcccgccgcggagaccgctgcg
tccgacgcgcccgcggagacctccgcgtcggacgcggaggcgcccgccgcggacgtcgtc
tcggcagaggccgcgtcgaccgccgacgagacggctccggccgccgatgccgccgaggcg
accgccgacgcagagaccaccccggcggagaccaccgaggcgccgaagaagccggcgcgt
ggccgtggccgcggccgcaacgcgaagaaggacgccgagaccgaggccgctccgggcacc
gacgccccggccgaatccgccgacgctccggctgccgagggcgcttccgagacgcccgcc
gagcaggcgccggacgccgaggcatcctccgacgactcgtcgaagaccgagtccggagag
ggcgacggcgagtcgtccggccgttcgcggagccggtcgcgcagccgcaaccgcaaccgc
aacaaggacaacgcccagggcaaccagggtcaggccggccagaatcagggcggcaaccag
aaccagggcgcgggtcagaaccagggcggcaacaacggcccggacgacgacgacgcgccc
ggccagagcggccgtggccgccagcgcaacaagcggcgtggccagggcgggggcggcgac
gagttcgagaccgagatcagcgaggacgacgtcctcatcccgatcgccggtgtgctcgac
gtcctcgacaactacgccttcgtccgcacgaccggctacctccccggcccgcaggacgtc
tacgtctcgctcggccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggc
gcgatcaagcagccccgcgagggcgagcagtcgagccggcagaagtacaacgcgctcgtc
aaggtcgactcgatcaacggcctgtccgtcgaggacgccgccggccgcgtcgagttcggc
aagctgacgcccctgtacccgcaggagcgcctgcgcctcgagaccggccccgagaagctg
acccagcggatcatcgacctcgtggccccgatcggcaagggacagcgcggtctcatcgtc
gcgccgcccaaggccggcaagacgatcgtgctgcagcagatcgccggcgcgatcgcgcag
aacaaccccgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcacc
gacatgcagcgcacggtcaagggcgaggtcatcgcctcgacgttcgaccgtcccgccgag
gaccacaccacggtcgccgagctcgcgatcgagcgcgccaagcgtctcgtcgagctcggc
cgcgacgtcgtcgtgctgctcgactcgatcacgcgcctcggccgcgcctacaacctgtcg
gctccgacgtcgggacgcgtcctgaccggtggcgtcgacgcgtcggcgctgtacccgccc
aagcgcttcttcggcgcggcgcgaaacatcgagaacggcggttcgctcacgatcctcgcg
acggcgctggtggagaccgggtccaagatggacgaggtcatcttcgaggagttcaagggc
acgggcaacagcgagctgcgtctgtcgcgtcagctggccgataagcgcatcttccccgcc
gtcgacgtcaacgcctcgtcgacgcgtcgcgaagagatgctgctctcgtccgacgaggtc
aagatcacgtggaagctgcgccgtgccctcgccgggctcgaccagcagcacgcgctcggc
gtcatcctcgacaagctcaaggagacgcagtccaacgtcgagttcctcgttcagatgcag
aagtcgatcccggcgccgaccacgcactcgggcgggcacgacaacagcatccgctga
DBGET
integrated database retrieval system