Methanocella paludicola: MCP_2785
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Entry
MCP_2785 CDS
T01142
Symbol
hjm
Name
(GenBank) Holliday junction migration helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mpd
Methanocella paludicola
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpd03400
]
MCP_2785 (hjm)
Enzymes [BR:
mpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCP_2785 (hjm)
DNA repair and recombination proteins [BR:
mpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MCP_2785 (hjm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
HHH_5
ResIII
HTH_61
DNA_pol_lambd_f
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
BAI62857
NITE:
MCP_2785
UniProt:
D1Z2D5
LinkDB
All DBs
Position
2732122..2734317
Genome browser
AA seq
731 aa
AA seq
DB search
MKIAELDLPTDIKDFYEASGIRELYPPQAEAVKKGFLDGKSLLAAIPTASGKTLLAEMAM
LKSIAAGGKALYIVPLKALASEKFERFRQFEGLGVRAGISTGDYDSKDEWLKDRDIIVAT
SEKTDSLLRNGAPWLSSLTVVVADEVHLIDSANRGPTLEVTLAKLKRLNPALQIIALSAT
IGNAKELADWMKAQLVVSEWRPTELKEGVFFGRAINFSNDKRVIKTPGPDDVQALVSDTL
AEGGQCIVFANTRKSSESIAQKLAKSLSRKMTEEEKAAFLEVKQQVMRHAETDTCAKLAA
CVEHGVAFHHAGLKGEHRHIIENAFRKNTVKVIACTPTLAAGLNLPARRVIIRDYRRFDV
NYGNVPIPVLEYKQMAGRAGRPGLDPYGEAVLIAKNYDELGELMENYVLSLPEQITSKLG
TEPAMRAHVLSAIATDFCGDVIGLNEFMDTTFYAHQRGDLSAVIDNVLDFLEAERMIIRT
ADRLRATELGRLTSRLYIDPLSASIIVRALEASKKRQEPYNTEMALLQLIASTPDVKSLY
LRRSDYGWIIKYTDEHISDFLTDVPDVGDETDFEAFLSSVKTAALVDMWVNEKNEEEMTA
FYNIGPGDVRNLMETCVWLMHSTAEISHLLKAPLTREARELAVRIDYGVSKELMDLIELE
GVGRVRARRLYEAGYKNREALKHVDLQVLAALMGEKVAAKILSQLGRKDVPVSTEPDEEV
MGQSTLFSFGD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagccgagctggacctgccgacagatatcaaggacttttacgaagcctcaggc
atcagggagctctacccgccccaggcggaggccgtaaaaaagggcttcctggacgggaag
agcctgctggcggccatacccacggccagcggcaagacgctcttagccgagatggccatg
ctcaagtccatcgccgccgggggtaaagcgctctatatcgttcctctgaaggcgctggcc
tcggagaagttcgagcggttcaggcagttcgagggcctcggggtcagggcaggcatatcc
acgggcgactacgactcgaaggacgagtggctcaaggatcgtgacatcatcgtcgccacc
tcggaaaagaccgactcgctgctccggaacggggccccgtggctgtcgagcctcaccgtg
gtcgtcgccgacgaggtacacctcatcgattctgctaacaggggcccgaccctggaggtc
accctggccaagctcaagcggctcaatcctgccttgcagatcatcgccctgtccgccacc
atcggcaacgctaaagagctcgctgactggatgaaggcacagctggtcgtaagcgagtgg
aggccgacggagcttaaagagggcgtattcttcggaagggcgatcaacttttctaacgat
aagcgggtcataaagacgcccggccccgacgacgttcaggcgctggtctccgacacgctg
gccgagggcggccagtgcatcgtgtttgccaacactaggaagagcagcgagagcatcgcc
cagaagctcgccaaaagcctctccaggaagatgacggaggaggaaaaggccgctttttta
gaggtcaagcagcaggtcatgcgccacgcggagacggacacgtgcgccaagctcgccgcc
tgcgtggagcacggcgtagccttccaccacgcggggctcaagggcgagcaccggcacatc
atcgagaacgccttcaggaagaacaccgtcaaggtcatcgcgtgcacgccgaccctggcg
gccggccttaacctgccggcccggcgagtgatcataagggactaccggcgcttcgacgtg
aactacgggaacgtgcccataccggtcctcgagtacaaacagatggccgggcgggccgga
aggcccgggctcgacccatacggagaggccgtgctcatcgcgaagaactacgatgagctg
ggcgagctcatggagaactacgtgctctcccttcccgagcagatcacctccaagctgggc
accgagcccgcgatgcgggcccacgtgctttcggccatcgccaccgatttctgcggcgac
gtcataggccttaacgagttcatggacaccacgttctacgctcatcagcgaggcgacctg
tccgccgtgatcgataatgtgctcgatttcctggaggccgagaggatgatcataaggacg
gcggaccggcttagggcgaccgagctgggcaggctgacgtcccgcctgtacatcgatcct
ctatccgcctccatcatcgtgagggcgctggaggcctccaagaagaggcaggaaccctat
aacactgagatggcccttttacagctgatagcctcgacgcccgacgtgaagtccctgtac
ctccgccggtcggactacggctggatcatcaagtacacggacgagcacatatcggacttc
ctcacagatgtgcccgacgtaggggacgagacggatttcgaagccttcctttcaagcgta
aagacggcagccctggtagacatgtgggtcaacgagaagaacgaggaggagatgaccgcc
ttctacaacatcggccccggcgacgtgcgtaatttaatggagacctgcgtctggctcatg
cactcgacggccgagatatcgcatttgctgaaagcgcccttgacccgggaagcacgggag
ctggccgtgcgcatcgactacggcgtcagcaaggagctcatggatctcattgagctggag
ggcgtgggccgcgtccgcgcccgccgtctctacgaggctggctataagaacagggaggcg
ctgaagcatgtcgacctccaggtactggcggccttaatgggcgagaaggtggccgcgaaa
atactgtcccagctcgggcgtaaagacgttcccgtctcgacggagcccgacgaagaggtc
atgggacagagcacgctgttcagcttcggggattaa
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