Mesotoga prima: Theba_0740
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Entry
Theba_0740 CDS
T02123
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mpg
Mesotoga prima
Pathway
mpg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Theba_0740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpg03021
]
Theba_0740
03400 DNA repair and recombination proteins [BR:
mpg03400
]
Theba_0740
Enzymes [BR:
mpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Theba_0740
Transcription machinery [BR:
mpg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Theba_0740
DNA repair and recombination proteins [BR:
mpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Theba_0740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DUF6843
Motif
Other DBs
NCBI-ProteinID:
AFK06455
UniProt:
I2F3F2
LinkDB
All DBs
Position
780794..784318
Genome browser
AA seq
1174 aa
AA seq
DB search
MRKANFGKRERWVFGRVYEPLEIPNLIEIQTRSFEWFINEGLLNVLKKYSPIKSQIQRSD
LKKGEKGFSLDFVATRIGEAKHSIQECKDKGLTYSVPLYVTVRITDLYTGEIKEEEAFFG
YLPYMTDNASFIINGAERVIVNQLVRSPGVYFVDEPTKAVSGSLPIYVAHFLPVKGAWYE
ILLNPNKQIMQARIDRRRKLNFFVFLKALGYENDLDLLRLFENEYDGSDEDELLANVGSM
ILEDVKTPGGDLIAEKGTLLTEEIIARAIEADVKTIKMPLPIAMKTFNALQKTYGEGMTE
DDAYIELFRKLRPGEIPRINAAKSYIANLYFSPDRFDFSDVGRYKVNSRLKKVYQDYLKE
VEGKKVSKDTDYSEESSILTVLDVVLAARHLTEIESRPELLDTKDHLGNKRVRTVGELME
TEFEKAFIKIHKLLEEKLTIYTSFDKISVQSLVNVRTLMTTLHQFFATSQLSQFMDQVNP
LAELTNKRRLSAIGPGGLKREHARFEVRDVHHSHYGRMCPIETPEGANIGLMTSLATFAK
IDKYGFLLTPYRKVQKGAVTNDIVYLAADEEERYNIAHSTVDMDEKGNIVDENVEIRYAG
EVRYVNREEVDYMSVSPKQIVSISTSLIPFLENDDANRALMGSNMQRQAVPVVKAEAPIV
GTGVEGVAARDSGYVVLSKHRGKVVSVDGRRIIVQRIDEKGKPELDERGKPIEDVYTLHK
FVRTNQDTAVNQRPIVSVGEIVQTGTPIADGPSTEMGELALGKNVLVAFMPWEGYNFEDA
ILVNQELLEDDTFTTIHVEMYETIARDTQLGPEEITADIPNVSKESLKNLDESGIVRIGA
YVTSQDILVGKVTPKGESETTPEEKIIRSVFGDRGRDVKDSSLKLPHGVEGRVIDVKVFE
KEEVSELGSGINKLVKVFVGIRKPLDVGDKLAGRHGNKGVVSNIIPKEDMPFLPDGTPIQ
LVLSPLGVPSRMNVGQVLETHLGWLGKLTNRYFATPIFDGATEEEIMTELYEARKRFGLE
DGDSEDLKTGKVTLRDGRSGNPFDYPIVVGVMYMLKLVHIAKDKIHARSTGPYSLIHQQP
LGGKAHFGGQRFGEMEVWALEAYGAAHTLNEMLTIKSDDIKGRNDVYKAILKGINIPEPG
IPESFKVLIKELQGLSLDVKVFDQNNVELDVDKL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggccaattttggcaaacgtgagcggtgggtctttggaagagtgtatgaacct
cttgaaatcccgaatctcattgagatccagactcgttccttcgagtggtttatcaatgaa
ggtcttctgaatgttctgaagaagtattcacccatcaagtcgcagatccagcgttcggac
cttaagaagggcgagaaaggcttctctctggattttgtagcaaccagaatcggtgaggca
aagcattccattcaggagtgcaaagacaagggtctcacttattcggttccactttatgta
acggtaagaatcactgacctctacactggagagatcaaagaggaagaggccttctttgga
tacttgccatatatgactgataacgcctctttcataatcaacggcgctgaaagggtaatt
gttaatcagcttgtaaggtctccaggcgtttatttcgtggatgagcctacaaaggcagtt
tctggttctttgccaatctatgtagctcacttccttcccgttaagggagcttggtacgaa
attctcttgaatcccaacaagcagatcatgcaggcaaggatagacagaagaaggaaacta
aacttcttcgtatttttgaaagcgctgggttatgaaaacgaccttgaccttctgaggctt
ttcgaaaacgaatacgacgggtctgacgaagatgaattgctcgcaaacgtggggagtatg
atcctagaggacgtaaagacgcctggtggtgatttgattgcagaaaaagggacactgcta
accgaagagattattgctagagcaattgaagcagatgtgaagaccataaagatgccgctt
ccaattgcaatgaaaacgttcaatgctttgcagaagacatacggcgaaggtatgactgag
gacgacgcttatatagagctcttcagaaaactgaggcctggcgaaattccaagaataaat
gccgcaaagagctacattgccaatttgtatttcagccctgatcgcttcgacttttccgat
gtaggaaggtacaaggtaaacagcaggctgaagaaggtctaccaggactatctaaaggaa
gttgaaggaaagaaagtctcaaaagatacagattactcagaagaatcctctattctcact
gtccttgatgtcgttcttgctgcaagacatctgaccgagattgaaagcaggccggagttg
cttgacaccaaggaccatcttggaaacaagcgtgtgaggacagtcggtgagctcatggaa
actgagttcgagaaggctttcataaaaatacataagcttctggaagaaaagcttacaata
tacacatcgtttgacaagatttctgttcagagccttgttaacgtaagaactttaatgact
acgcttcatcagttctttgcgacaagtcagctttctcagttcatggaccaggttaatcct
cttgccgaactgactaacaagaggagactgtctgctattggacctggtggacttaagaga
gaacacgcaagattcgaggttcgtgatgtccatcactcgcactacgggagaatgtgtcca
atagaaacccccgaaggtgccaatatcgggttgatgacttcattggcgacctttgcaaag
atagataagtacggtttccttttgactccgtacagaaaggttcagaaaggagccgttact
aacgatattgtatatttagccgcagatgaagaagagcgttacaatatcgctcattccact
gtagatatggacgaaaagggtaatatcgtcgatgaaaatgtcgagattagatatgcaggt
gaagtgagatatgttaacagggaggaagtcgattacatgtcggtttcgcccaaacagata
gtctctatctcgacatctttgatacccttccttgaaaatgacgacgcgaacagagccctc
atggggtctaacatgcagaggcaggccgtgcctgttgtcaaggccgaggcaccaattgtg
ggaaccggtgtggaaggagttgcagcgagagactcgggatacgtggttctttctaagcac
agaggaaaggtggttagtgtagacggaagaagaataatcgttcagagaatagatgaaaag
ggcaagccagaactcgacgagagagggaagcctatagaagacgtatatacgttgcacaag
ttcgtaagaacaaatcaagacacggcagtaaaccagagaccaatagtttccgttggcgag
atcgtccagacaggaactccgattgccgatggcccatcaactgaaatgggagaacttgct
cttggaaagaatgtgcttgtggctttcatgccctgggaaggatacaatttcgaagatgct
attcttgtcaatcaggagctactggaagacgacacctttacaaccatacatgtcgaaatg
tacgaaacaattgccagagacactcagcttggtccagaagaaattactgcagatatcccg
aacgtctcgaaggaatcactgaaaaaccttgatgagagcggtatagttaggatcggagct
tatgtgacttctcaagacattctagttggcaaagtcactcccaaaggcgagtctgaaacc
actcccgaagaaaagataatcagatcagtcttcggagacagaggaagggacgtcaaggat
tcatccctcaaacttcctcatggcgtcgaaggcagagtaatagatgtaaaggtattcgaa
aaggaagaggtatccgaactgggttccggcattaacaagcttgtgaaggttttcgtcggc
atcagaaagccactcgatgtgggtgataaacttgccggtagacacggcaataagggtgtc
gtttcgaatattatcccgaaggaggatatgccattccttccagacgggacgccaattcag
cttgttctgtcacctctgggagttccatcaagaatgaacgttggtcaggttctagaaacc
cacttaggatggcttggaaagctcactaatcgttattttgcaactccaatatttgatgga
gctactgaagaagaaatcatgaccgaactctacgaagcgagaaagaggtttggccttgag
gacggagacagtgaggatctgaagaccggtaaagtcactctgagagatggacgaagcggc
aatcctttcgactatcctattgttgtgggagtcatgtacatgcttaaacttgttcacata
gcaaaggataagatacatgccagatctaccgggccttactcgctcattcatcagcaaccc
cttggcgggaaagctcacttcggagggcagaggtttggagagatggaagtctgggcgctc
gaagcttatggagcagctcacactctgaacgaaatgctgacaattaagtcggacgacatc
aagggaagaaacgatgtctacaaagcgatacttaaagggataaacatcccggaacccggg
attccggagagtttcaaggtccttattaaagagctacagggactttcactcgacgttaag
gttttcgatcaaaacaatgtcgagctggatgtggacaaattatga
DBGET
integrated database retrieval system