KEGG   Mesotoga prima: Theba_0740
Entry
Theba_0740        CDS       T02123                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mpg  Mesotoga prima
Pathway
mpg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Theba_0740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpg03021]
    Theba_0740
   03400 DNA repair and recombination proteins [BR:mpg03400]
    Theba_0740
Enzymes [BR:mpg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Theba_0740
Transcription machinery [BR:mpg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Theba_0740
DNA repair and recombination proteins [BR:mpg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Theba_0740
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 DUF6843
Other DBs
NCBI-ProteinID: AFK06455
UniProt: I2F3F2
LinkDB
Position
780794..784318
AA seq 1174 aa
MRKANFGKRERWVFGRVYEPLEIPNLIEIQTRSFEWFINEGLLNVLKKYSPIKSQIQRSD
LKKGEKGFSLDFVATRIGEAKHSIQECKDKGLTYSVPLYVTVRITDLYTGEIKEEEAFFG
YLPYMTDNASFIINGAERVIVNQLVRSPGVYFVDEPTKAVSGSLPIYVAHFLPVKGAWYE
ILLNPNKQIMQARIDRRRKLNFFVFLKALGYENDLDLLRLFENEYDGSDEDELLANVGSM
ILEDVKTPGGDLIAEKGTLLTEEIIARAIEADVKTIKMPLPIAMKTFNALQKTYGEGMTE
DDAYIELFRKLRPGEIPRINAAKSYIANLYFSPDRFDFSDVGRYKVNSRLKKVYQDYLKE
VEGKKVSKDTDYSEESSILTVLDVVLAARHLTEIESRPELLDTKDHLGNKRVRTVGELME
TEFEKAFIKIHKLLEEKLTIYTSFDKISVQSLVNVRTLMTTLHQFFATSQLSQFMDQVNP
LAELTNKRRLSAIGPGGLKREHARFEVRDVHHSHYGRMCPIETPEGANIGLMTSLATFAK
IDKYGFLLTPYRKVQKGAVTNDIVYLAADEEERYNIAHSTVDMDEKGNIVDENVEIRYAG
EVRYVNREEVDYMSVSPKQIVSISTSLIPFLENDDANRALMGSNMQRQAVPVVKAEAPIV
GTGVEGVAARDSGYVVLSKHRGKVVSVDGRRIIVQRIDEKGKPELDERGKPIEDVYTLHK
FVRTNQDTAVNQRPIVSVGEIVQTGTPIADGPSTEMGELALGKNVLVAFMPWEGYNFEDA
ILVNQELLEDDTFTTIHVEMYETIARDTQLGPEEITADIPNVSKESLKNLDESGIVRIGA
YVTSQDILVGKVTPKGESETTPEEKIIRSVFGDRGRDVKDSSLKLPHGVEGRVIDVKVFE
KEEVSELGSGINKLVKVFVGIRKPLDVGDKLAGRHGNKGVVSNIIPKEDMPFLPDGTPIQ
LVLSPLGVPSRMNVGQVLETHLGWLGKLTNRYFATPIFDGATEEEIMTELYEARKRFGLE
DGDSEDLKTGKVTLRDGRSGNPFDYPIVVGVMYMLKLVHIAKDKIHARSTGPYSLIHQQP
LGGKAHFGGQRFGEMEVWALEAYGAAHTLNEMLTIKSDDIKGRNDVYKAILKGINIPEPG
IPESFKVLIKELQGLSLDVKVFDQNNVELDVDKL
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgagaaaggccaattttggcaaacgtgagcggtgggtctttggaagagtgtatgaacct
cttgaaatcccgaatctcattgagatccagactcgttccttcgagtggtttatcaatgaa
ggtcttctgaatgttctgaagaagtattcacccatcaagtcgcagatccagcgttcggac
cttaagaagggcgagaaaggcttctctctggattttgtagcaaccagaatcggtgaggca
aagcattccattcaggagtgcaaagacaagggtctcacttattcggttccactttatgta
acggtaagaatcactgacctctacactggagagatcaaagaggaagaggccttctttgga
tacttgccatatatgactgataacgcctctttcataatcaacggcgctgaaagggtaatt
gttaatcagcttgtaaggtctccaggcgtttatttcgtggatgagcctacaaaggcagtt
tctggttctttgccaatctatgtagctcacttccttcccgttaagggagcttggtacgaa
attctcttgaatcccaacaagcagatcatgcaggcaaggatagacagaagaaggaaacta
aacttcttcgtatttttgaaagcgctgggttatgaaaacgaccttgaccttctgaggctt
ttcgaaaacgaatacgacgggtctgacgaagatgaattgctcgcaaacgtggggagtatg
atcctagaggacgtaaagacgcctggtggtgatttgattgcagaaaaagggacactgcta
accgaagagattattgctagagcaattgaagcagatgtgaagaccataaagatgccgctt
ccaattgcaatgaaaacgttcaatgctttgcagaagacatacggcgaaggtatgactgag
gacgacgcttatatagagctcttcagaaaactgaggcctggcgaaattccaagaataaat
gccgcaaagagctacattgccaatttgtatttcagccctgatcgcttcgacttttccgat
gtaggaaggtacaaggtaaacagcaggctgaagaaggtctaccaggactatctaaaggaa
gttgaaggaaagaaagtctcaaaagatacagattactcagaagaatcctctattctcact
gtccttgatgtcgttcttgctgcaagacatctgaccgagattgaaagcaggccggagttg
cttgacaccaaggaccatcttggaaacaagcgtgtgaggacagtcggtgagctcatggaa
actgagttcgagaaggctttcataaaaatacataagcttctggaagaaaagcttacaata
tacacatcgtttgacaagatttctgttcagagccttgttaacgtaagaactttaatgact
acgcttcatcagttctttgcgacaagtcagctttctcagttcatggaccaggttaatcct
cttgccgaactgactaacaagaggagactgtctgctattggacctggtggacttaagaga
gaacacgcaagattcgaggttcgtgatgtccatcactcgcactacgggagaatgtgtcca
atagaaacccccgaaggtgccaatatcgggttgatgacttcattggcgacctttgcaaag
atagataagtacggtttccttttgactccgtacagaaaggttcagaaaggagccgttact
aacgatattgtatatttagccgcagatgaagaagagcgttacaatatcgctcattccact
gtagatatggacgaaaagggtaatatcgtcgatgaaaatgtcgagattagatatgcaggt
gaagtgagatatgttaacagggaggaagtcgattacatgtcggtttcgcccaaacagata
gtctctatctcgacatctttgatacccttccttgaaaatgacgacgcgaacagagccctc
atggggtctaacatgcagaggcaggccgtgcctgttgtcaaggccgaggcaccaattgtg
ggaaccggtgtggaaggagttgcagcgagagactcgggatacgtggttctttctaagcac
agaggaaaggtggttagtgtagacggaagaagaataatcgttcagagaatagatgaaaag
ggcaagccagaactcgacgagagagggaagcctatagaagacgtatatacgttgcacaag
ttcgtaagaacaaatcaagacacggcagtaaaccagagaccaatagtttccgttggcgag
atcgtccagacaggaactccgattgccgatggcccatcaactgaaatgggagaacttgct
cttggaaagaatgtgcttgtggctttcatgccctgggaaggatacaatttcgaagatgct
attcttgtcaatcaggagctactggaagacgacacctttacaaccatacatgtcgaaatg
tacgaaacaattgccagagacactcagcttggtccagaagaaattactgcagatatcccg
aacgtctcgaaggaatcactgaaaaaccttgatgagagcggtatagttaggatcggagct
tatgtgacttctcaagacattctagttggcaaagtcactcccaaaggcgagtctgaaacc
actcccgaagaaaagataatcagatcagtcttcggagacagaggaagggacgtcaaggat
tcatccctcaaacttcctcatggcgtcgaaggcagagtaatagatgtaaaggtattcgaa
aaggaagaggtatccgaactgggttccggcattaacaagcttgtgaaggttttcgtcggc
atcagaaagccactcgatgtgggtgataaacttgccggtagacacggcaataagggtgtc
gtttcgaatattatcccgaaggaggatatgccattccttccagacgggacgccaattcag
cttgttctgtcacctctgggagttccatcaagaatgaacgttggtcaggttctagaaacc
cacttaggatggcttggaaagctcactaatcgttattttgcaactccaatatttgatgga
gctactgaagaagaaatcatgaccgaactctacgaagcgagaaagaggtttggccttgag
gacggagacagtgaggatctgaagaccggtaaagtcactctgagagatggacgaagcggc
aatcctttcgactatcctattgttgtgggagtcatgtacatgcttaaacttgttcacata
gcaaaggataagatacatgccagatctaccgggccttactcgctcattcatcagcaaccc
cttggcgggaaagctcacttcggagggcagaggtttggagagatggaagtctgggcgctc
gaagcttatggagcagctcacactctgaacgaaatgctgacaattaagtcggacgacatc
aagggaagaaacgatgtctacaaagcgatacttaaagggataaacatcccggaacccggg
attccggagagtttcaaggtccttattaaagagctacagggactttcactcgacgttaag
gttttcgatcaaaacaatgtcgagctggatgtggacaaattatga

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