Methanobrevibacter ruminantium: mru_1087
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Entry
mru_1087 CDS
T01166
Symbol
uvrB
Name
(GenBank) excinuclease ABC B subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
mru_1087 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mru03400
]
mru_1087 (uvrB)
DNA repair and recombination proteins [BR:
mru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mru_1087 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
mru_1087 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
DUF87
Microtub_bd
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADC46938
UniProt:
D3E327
LinkDB
All DBs
Position
complement(1428339..1430294)
Genome browser
AA seq
651 aa
AA seq
DB search
MKEFKLKSPYKPLGDQPQAIESLSNGIKEGFHEQTLLGVTGSGKTYTMANIIQNVQKPTL
IISHNKTLAAQLYEEFKVFFPDNAVEYFVSYYDYYQPEAYVPRTDTFIDKEASINEDIDI
MRHSATQSLLSRDDVIVVSSVSCIYGIGSPEDYGEFAFSINVGDIYDRGDILRKLIFMQY
ERNDIAFERGQFRVRGDVIEINPVHGTPPIRIELFGDEIDAISLINPVTGMREESINRYV
IFPAKHFVVGADRMDQALKDIEAELQSRLNELNLEGKYLEAQRLEQRTRFDLEMLREMGY
CPGIENYSMHLSGRNWGDMPYSLLKYFPDDYLTIIDESHVTVPQIRGMYNGDRARKETLV
NYGFRLPSAKENRPLRFDEFEASQNQVLYVSATPGPYELSRSKNVVEQIIRPTGLVDPKI
TIRPVKGQVEDLLGEVRRKVEHDQRILVTTLTKRMAEDLTDYYAKIGIKVRYLHSEIDTL
ERVEIIDDLRRGEFDVLVGVNLLREGLDLPEVGLVAILDADKEGFLRSETSLIQTIGRAA
RNVDGEVLMYVDEMTDSVRNAVDITNKRRKLQMAYNEKYNITPKTTQRTLKEKKLADRAP
SRDDLRGMPKDELKLLIKDLEAEMREAANNLEFEKAASLRDQIVALKSIKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaattcaaactgaaatcaccatataagcctcttggagaccagccacaagctatc
gaatcattatcaaacggaatcaaagagggattccacgaacagaccttgctaggagtgaca
ggctccggcaaaacttataccatggcaaacattatacaaaacgtacagaagccaactctt
atcatatcacataacaagacccttgctgcacagctttatgaagaattcaaggtctttttc
ccagataatgcagttgaatactttgtcagctactacgactattaccagcctgaggcatat
gtccctagaacagacactttcatcgacaaggaagcctcaataaacgaggacatagacata
atgaggcattctgccacacagtctctcctatctcgtgacgatgtcatcgtagtaagcagc
gtatcctgcatctacggaataggttcccctgaagactatggggagtttgcattctccata
aatgtcggagacatctacgaccgtggagatatacttagaaagctgatctttatgcaatat
gaaagaaatgacattgcatttgaaagaggtcagtttagggtaagaggagatgttatcgaa
ataaaccctgttcatggaactcccccaataagaatcgagctcttcggagatgaaatagat
gcaataagcctcataaacccagtgactgggatgagagaggaaagcataaataggtatgta
atatttccagcaaagcactttgtagtaggtgcagacagaatggatcaagcccttaaggac
atagaagcagagcttcaatcaaggctcaatgagctgaaccttgagggcaagtatcttgaa
gctcaaaggcttgagcaaaggacaagattcgatttagagatgcttcgggagatgggatac
tgtccaggaatcgaaaactattccatgcacctttcagggagaaactggggagacatgcct
tattcccttcttaaatacttcccagatgactatcttacaataatagacgagtcccacgta
accgttccccagattaggggaatgtacaatggagacagagcaagaaaggaaacacttgta
aactatggattccgccttccatcagcaaaggaaaacaggccacttagatttgatgagttt
gaagcaagccaaaaccaggtattatatgtttcagcaacaccagggccttatgagctatca
agaagcaagaatgtggtagaacagatcatccgtccaacagggcttgttgaccctaaaata
acaataagaccagttaagggacaggttgaagacctcctaggagaagtaaggcgaaaggtg
gagcatgaccaaagaatacttgtaaccactttgacaaaaagaatggccgaagacctgacc
gactattatgcaaagattggaatcaaggtaagataccttcattcagagattgataccctg
gaaagggttgaaataatagacgacctaagaaggggagagtttgatgtccttgtaggagta
aacctcctaagggaaggacttgacctgccagaggtaggccttgtagcgattctggatgca
gataaggaaggatttttacgctctgagacatcccttattcagacaataggaagggctgca
agaaacgtagacggagaggtattgatgtatgttgatgagatgactgattcagtcaggaat
gcagtggacattacaaacaagagaagaaagctgcagatggcatacaatgagaagtataat
atcactccaaagaccacacaaagaacccttaaggagaagaagcttgccgacagagcccca
tcaagagatgacttaagaggcatgcctaaagatgaacttaagctattgattaaggacctt
gaagcagaaatgagagaggctgctaataatcttgagttcgagaaggccgccagcttgaga
gatcagattgttgccttaaagagcattaaaaaatag
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