Methylocystis sp. SC2: BN69_2894
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Entry
BN69_2894 CDS
T02324
Symbol
rpoBC
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta\'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msc
Methylocystis sp. SC2
Pathway
msc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN69_2894 (rpoBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msc03021
]
BN69_2894 (rpoBC)
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_2894 (rpoBC)
Enzymes [BR:
msc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN69_2894 (rpoBC)
Transcription machinery [BR:
msc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN69_2894 (rpoBC)
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN69_2894 (rpoBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CCJ08345
UniProt:
J7QVR3
LinkDB
All DBs
Position
complement(2976004..2980308)
Genome browser
AA seq
1434 aa
AA seq
DB search
MRALIRHASHDTFSRKREKERDKEFQPAEDARRASIPVQEKTMNQQEVMNLFNPVVATQA
FDQIQISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYK
RMKYKGVICEKCGVEVTLARVRRDRMGHISLAAPVAHIWFLKSLPSRIGLLLDMTLKDLE
RILYFESYIVIDPGLTPLKERQLLSEDEYLRAQDEYGQDTFTAMIGAEAIRKLLESMDLE
AIAASLRIEISEAKTELKPKKLAKRLKIIEAFLQSGNRPEWMILKEVPVIPPDLRPLVPL
DGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQEAVDALFDNGRRGRV
ITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALE
LFKPFIYSRLDAKGYSATVKQAKKLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQ
AFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPAN
GQPIIVPSQDIVLGLYYLTLERDGEPGQGMAFASQGEIEHAIAAKAVTLHTKIKGRAWTY
DEKGKRVSKIFDTTPGRMMLGQLMPKHDKIPFDVVNKLMTKKEISNMIDTVYRNCGQKET
VIFCDRIMSLGFREAFKAGISFGKDDMVVPENKEAIVSETRAAAKEYEQQYNDGLITQGE
KYNKVVDAWMKCTDKLAEEMMQRISSVSKDEHGRDVPINSIYMMSHSGARGSPQQMKQLA
AMRGLMAKPSGEIIESPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLV
DVAQDSIISSTDCGSQNGIRMRAIIDAGQVVASLTSRILGRTAAEDLMSQDGKTVIVPAG
EMIQEQHIDAINAAGIQEVKIRSVLTCEAKNGVCGKCYGRDLARGTPVNMGEAVGVIAAQ
SIGEPGTQLTMRTFHIGGAAQLADQSFIESNFEGKVHVRNRHLARNSDGDLIVMARNVAI
VILGPNGEERAVNRLLYGAKMKVDEGDKVKRGQRLAEWDPYTRPIISEVDGVIGFEELVE
GQSMSETVDESTGITKRMVMDYRLNLRSASLKPSIVIKGPDGKIVKLARGGDARYLLPVD
SIIAVEPGSTVKAGDIVARISVESAKTRDITGGLPRVAELFEARRPKDHAIIAEISGTVA
FGKDYKNKQRITITPTEEGADPVEYLIPKGKHIHLQDGDVVEKGDYIVDGNPAPHDILAI
KGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKIDIVDPGDTGFLEGEQVDKL
ELEEANAKALENGGKPATGTPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKIDP
LVGLKENVIVGRLIPAGTGAAMAKFRAVAGGRDELIIEQRAEAAEPAPALPPAE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
gtgagggccctcatccgtcatgcttcgcatgacaccttctcccgcaagcgggagaaggag
cgcgacaaagaatttcaaccggcggaagacgcaaggcgcgcttccatcccggtccaggag
aagaccatgaatcagcaagaggtcatgaatctcttcaatccggtcgtggcgacgcaggcc
ttcgaccagattcagatttcgatcgcaagcccggagaagattctttcctggtcttacggc
gagatcaaaaagcccgagacgatcaactaccgcacgttcaagcccgagcgcgacggactg
ttctgcgcgcgcatcttcggtccgatcaaggactatgagtgcctgtgcggcaaatataag
cggatgaaatacaagggcgtcatctgcgagaagtgcggcgtcgaggtcaccctcgcgcgc
gtgcggcgcgaccgcatgggccacatctcgctcgccgcgcccgtcgcccacatctggttc
ctgaagtcgctgccctcgcgcatcggcctgttgctcgacatgacgctcaaggatcttgag
cgcatcctctacttcgagtcctacatcgtcatcgatccgggcctgacgccgctcaaggag
cgtcagttgctgtcggaagacgaatatctgcgcgcgcaggacgaatatggccaggacacg
ttcacggccatgatcggcgcggaagcgatccgcaagcttcttgagtcgatggacctcgaa
gccatcgccgcgtcgctgcgcatcgagatctccgaagcgaagaccgagctcaagcccaag
aagctggcgaagcgtctcaagatcatcgaggctttcctgcagtcgggcaatcgccccgaa
tggatgatcctcaaggaagttccggtcatcccgccggatctgcgtccgctcgtgccgctg
gacggcggccgcttcgcgacctcggatctgaacgatctctaccgccgcgtcatcaaccgc
aacaatcgtctaaagcggctgatcgaattgcgcgcgccggacatcatcatccgtaacgag
aagcgcatgttgcaggaggccgtcgacgcgctgttcgacaacggccgccgcggacgggtg
atcacgggcgccaacaagcgtccgctgaagtcgctcgccgacatgctgaagggcaagcag
ggccgcttccgccagaacctcttgggcaagcgcgtcgattattccggccgctcggtgatc
gtcgtcggtccggagctgaagctgcatcagtgcggcctgcccaagaagatggcgctcgag
ctgttcaagcccttcatctattcgcgtctcgacgcgaagggctattcggcgaccgtcaag
caggcgaagaagctcgtcgaaaaggaaaagccggaagtctgggacatcctcgacgaggtc
attcgcgagcatccggtgctgctgaatcgcgcgccgactctgcaccgtctcggcattcag
gccttcgagccggtgctgatcgagggcaaggcgatccagctgcatccgctcgtctgcgcc
gccttcaacgccgacttcgacggcgaccagatggccgtgcatgtgccgctgtcgcttgaa
gcgcagctcgaagcgcgcgtgctgatgatgtcgacgaacaacattctgcatccggccaat
ggtcagccgatcatcgtgccgtcgcaggatatcgttctcggcctctattatctcacgctt
gagcgcgacggcgaacccggacagggcatggccttcgcgagccagggcgagatcgagcac
gcgatcgccgccaaggcggtcacgctccacaccaagatcaagggccgcgcctggacctat
gatgagaagggcaaacgcgtgtcgaagattttcgacacgacgcccggccgcatgatgctc
ggccagctcatgccgaagcacgacaagattccctttgacgtcgtcaacaaactgatgacc
aagaaggaaatctcgaacatgatcgacaccgtctaccgcaactgcggtcagaaggagacg
gtcatcttctgcgaccgcatcatgtcgcttggcttccgcgaagccttcaaggcgggaatc
tccttcggcaaggacgacatggtcgtgccggaaaacaaggaggcgatcgtctccgagacg
cgggcggcggccaaggaatatgagcagcagtataatgacggcctgatcacccagggcgaa
aaatacaacaaggtcgtcgacgcctggatgaagtgcacggacaagctcgccgaggagatg
atgcagcgcatctcgtcggtgagcaaggacgagcatggccgcgacgtgccgatcaactcg
atctacatgatgtcgcattccggcgcgcgcggctcgccgcagcagatgaagcagctggcc
gcgatgcgcgggctgatggccaagccctcgggcgagatcatcgagagcccgatcatctcg
aacttcaaggaaggcctcaccgtccttgaatacttcaactccacgcacggcgcccgcaag
ggtctcgccgacacggcgttgaagacggcgaactcgggctatctcacgcgccgcctcgtt
gacgtcgcgcaggattccatcatctcttcgactgactgcggctcgcagaacggcatccgc
atgcgcgcgatcatcgacgcgggacaggtcgtcgcctcgctgacgtcgcgaatcctcggc
cgcaccgcggcggaagatctgatgtcgcaggacggcaagaccgtgatcgtgccggccggc
gagatgatccaggagcagcacatcgacgcgatcaacgccgccggcattcaggaggtgaag
attcgctcggtcctgacctgcgaggccaagaacggcgtctgcggcaagtgctatggacgc
gatctcgcgcgcggcacccccgtcaatatgggcgaagccgtcggcgtcatcgcggcgcag
tcgatcggggagccgggcacgcagctcaccatgcgcaccttccatatcggcggcgctgcg
cagctggctgaccagtcgttcatcgagtcgaacttcgagggcaaggtgcatgtgcgcaat
cgccatctcgcccgcaactcggacggcgacctcatcgtcatggcgcgtaacgtcgccatc
gtgatcctcggccccaatggcgaggagcgggcggtgaaccgcctgctctatggcgccaaa
atgaaggtcgacgagggcgacaaggtgaagcgcggccagcgactggccgagtgggaccct
tacacgcgtccgatcatcagcgaagtcgacggcgtcatcggcttcgaggagctcgtcgaa
gggcaatcgatgtcggagacggtcgacgaatcgaccggcatcaccaagcgcatggtcatg
gactaccgcctgaacctgcgttcggccagtctgaagccgtcgatcgtcatcaagggcccc
gacggcaagatcgtcaaactggcccgcggcggcgacgcacgctacttgctgcccgtcgac
tcgatcatcgccgtcgaaccgggctcgacggtgaaggccggcgacattgtcgcgcgtatt
tcggtggagagcgccaagacccgcgacatcaccggcggtctgccgcgcgtcgccgagctt
ttcgaggcgcgccgtccgaaagatcacgcgatcatcgcggaaatctccggcacggtcgcc
ttcggcaaggactacaagaacaagcagcgcatcaccatcacgccgaccgaggaaggcgcg
gatccggtcgaatatctgatcccgaagggcaagcatatccaccttcaggatggcgacgtc
gtcgagaagggcgattacatcgtcgacggcaatccggcgccgcatgacattctggcgatc
aaaggcgtggaggagcttgcggcttacctcgtcaacgagatccaggaggtctaccggctg
cagggcgtcaacatcaacgacaagcacatcgaagtgatcgtgcgtcagatgttgcagaag
atcgacatcgtcgatccgggcgacaccggcttcctcgaaggcgagcaggtcgacaagctg
gagctcgaggaagcgaacgccaaggcgctcgagaatggcggcaagcctgcgacgggcacg
ccggtgctgctcggcatcaccaaggcctcgctgcagacgcgctccttcttctccgccgcc
tccttccaggagacgacgcgcgtgctcaccgaggccgccgtcaacggcaagatcgacccg
ctcgtcgggctcaaggagaacgtcatcgtcggccggctcattccggccggcaccggcgcg
gcgatggcgaagttccgcgccgtcgctggcggacgcgacgaactcatcatcgagcagcgc
gccgaagcggccgagcctgcgccggcgctgccgccggcggagtga
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integrated database retrieval system
