Myxococcus stipitatus: MYSTI_02779
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Entry
MYSTI_02779 CDS
T02436
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
msd
Myxococcus stipitatus
Pathway
msd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYSTI_02779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_02779
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_02779
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYSTI_02779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_21
AAA_16
AAA_29
SMC_N
nSTAND1
UvrA_DNA-bind
RsgA_GTPase
nSTAND3
AAA_25
AAA_22
AAA_33
NACHT
AAA_15
cobW
Viral_helicase1
NTPase_1
DnaJ_CXXCXGXG
HypA
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
AGC44095
UniProt:
L7U8F4
LinkDB
All DBs
Position
3527066..3532372
Genome browser
AA seq
1768 aa
AA seq
DB search
MHKTHLVGARTHNLKELSVDLAEGELVCITGVSGAGKSSLALDTLYAEGQRRFVESFSPY
ARQFLERLERPPMEALEPVAAGVAVDRRAPVKSSRSTVATLADVEPYLSALFTREAMPVC
PTCGVEAVRTDARSAATALLRESPDAPALIAFPLRIPDTASFLDARARLLKDGFHRLVVQ
GEVRELESLKPSEATDSAGVARVLVDRVKLSQSQLSRVTQAVEDAWNRAEGEAVVWVAGG
EAKRVRRGLVCPKCAREFEAARPGLFSYQSPVGACAACRGFGRTIGIDWEKVTPNPALSL
SEGAIRPWSGASTEWERGMLQRWCREKGIPMDKPWSSLTNAQRESVLEGAGDYDEGRQYP
GVRAWFRWMESRTYKMHVRVLLARYRAYSLCQSCGGARLNEQARAYRVGGLDLPGWHGLE
LTEAVARLEALRPTTGQGELARRELSARLRYLRRVGLGYLTLDRQARTLSGGEAQRVSLT
AALGTSLTGSLFVLDEPTVGLHPGDVPPLTEAIAELAERGNIALVIEHDPLVIRSAHRVL
ELGPGAGREGGRLCFDGTPEALAKREDLPTGRLLAGTGEAPRTPRKRTGSLEIRGAREHN
LKALSVSVPLGVLCAVTGPSGSGKSTLVDEVIYRHLARRLGVKDVEAPGAVDALEGAEEV
KSITFVDQSPLGRTSRGNAATYTKAWDKLRELFASEPDAEVRGLTPAHFSFNVDKGRCEA
CSGEGYETVEMQFLADVALLCAVCRGRRFKEEVLAVRHQGFSVAQVLEMTVAEVLQHFGK
DTALQRTLGPVARLGLGYLPLGQPLSTLSGGEAQRLKLARALASESKDALFIIDEPSAGL
HAEDVRHVIDALHALVDRGASVLVVDHDVSVMKASDWMVDLGPVGGRDGGRLVAEGTPAD
VARGKGATAEALRGERRAQARPSKARKVAKDAAPAIEVEHAREHNLQDVSCKIPLGKLTV
VTGPSGSGKSSLAFDVVFAEGQRRFLETLSPYARQFLPTMPRPDVERVSSIPPSVALEQR
TSRAGGTSTVATVTEVAHYLRLLFAKLGEPHCPKDDTPITSMSPELLFAQLQAMKGEGTV
LAPAVRARKGTYLDVFTAAARAGITQAIVDGALASTDDPPRLAKTREHDIDLVMFEGKLS
KLPRDLFDKALGWGQGALKIRAGKGETLLSTERTCPRCGTAVPELDPRWFSFNTKQGRCD
SCEGTGIQGGPTAQAEGETAPCKACGGSRLDPVPRGVRLEGARYHEVVRQSVASALARVK
GWKFKGDRALLGEPSRQELLRRMEFLERVGLGYLSLDRNAASLSGGEMQRLRLSAQLGAG
LTGAMYVLDEPTIGLHPRDTHRLLDNLRALVNTGSTVLVVEHDSDTIRAADHLLDLGPTG
GRGGGRILAEGPPDVVLQGDSPTAYALRESQVRPPSGRGAPQKWIELKGARANNLKRVDL
RLPVGRLNVVSGVSGSGKSTLVRHVLYPALREALELVSSKPGPFDSLRGVEAVKRVMSVD
QSPIGRTPRSVPATFLGIWDELRRAFAATPEAKIRGFSAARFSFNTASGGRCTTCEGQGS
ISHEMSFLPDVVTPCEACGGARFDAATLEIRYHGLSIGDVLRLSADEAKDVFKALPKVAA
PLQCLSDLGVGYLQLGQGSNTLSGGEAQRLKLASELTASSRHEPTLYVLDEPTTGLHLGD
VEKLITFMGRLVDRGDTLVVIEHHPSVIGAADHVVELGPEGGEEGGLIVAEGTPREVAKV
KSATGRVLRSLFTNEEPASSRRGSGASR
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagacccacctcgtaggcgcccgcacgcacaacctgaaggaactctccgtcgac
ctggccgagggggagctggtctgcatcaccggcgtctcgggggcgggcaagtcgagcctg
gcgctcgacacgctgtacgccgagggacagcggcgcttcgtggagagcttcagcccctat
gcccggcagttcctggagcggctggagcggccgcccatggaggcgctggagcctgtcgcc
gcgggtgtggcggtggaccggcgcgcgccggtgaagagctcgcgctcgacggtggccacg
ctggcggacgtggagccgtacctgtccgcgctcttcacgcgtgaggcgatgcccgtgtgc
cccacgtgcggcgtggaggcggtgcgcaccgatgcgcgctccgcggcgacggcgctcttg
cgcgagtctccggatgcgcccgccctcatcgcgttcccgctgcgcatcccggacacggcg
tcgttcctggatgcccgcgcgcggctcttgaaggacggcttccaccggctggtggtgcag
ggcgaggtgcgggagctggagtcgctcaagccctcggaggcgacggactcggcgggggtg
gcgcgggtgctggtggaccgggtgaagctgtcgcagtcgcagctctcgcgcgtgacgcag
gcggtggaggacgcgtggaaccgcgcggagggcgaggccgtggtgtgggtggccggcggg
gaggcgaagcgcgtgcgccggggcctggtgtgtcccaagtgcgcgcgggagttcgaggcc
gcgcgccccgggttgttcagctaccagtcccccgtgggcgcgtgcgcggcgtgccggggc
tttggccgcaccatcggcatcgactgggagaaggtgacgcccaacccggcgctgagcctg
tcggagggcgccatccgcccctggtccggtgcgtcgacggagtgggagcgaggcatgctc
cagcgctggtgccgcgagaagggcatccccatggacaagccctggtcctcgctgacgaac
gcgcagcgcgagtcggtgctggagggcgcgggggactatgacgagggccgccagtatccc
ggcgtgcgcgcgtggttccggtggatggagagccgcacgtacaagatgcacgtgcgcgtg
ctgctggcgcgctaccgggcgtattcgctgtgccagagctgtggtggcgcgcgactcaac
gagcaggcccgggcgtaccgcgtgggcgggttggacttgccggggtggcacgggctggag
ctgacggaggcggtggctcggctggaggcgctgcggccgacgacggggcagggggagctg
gcgcggcgggagctgtccgcgcgcctgcgctacctgcgccgcgtgggcctgggctacctc
acgctggaccgtcaggcgcgcacgctgtccggaggcgaggcgcagcgcgtgtcgctgacg
gcggcgctgggcacgtcgctgacgggctcgctcttcgtgctggacgagcccaccgtgggc
ctccacccgggggatgtgccgccgctgacggaggccatcgccgagctggccgagcgcggc
aacatcgcgctggtgatcgagcatgacccgctggtcatccgctccgcgcatcgcgtgctg
gagctggggccgggcgcgggccgggaggggggccggctgtgcttcgacggcacgcccgag
gcgctcgcgaagcgcgaggacctgcccaccggtcggctcctcgcggggacgggggaggcg
cccaggacgccgcgcaagcgcaccggctcgctggagattcgcggggcgcgggagcacaac
ctgaaggcgctgtcggtgagcgtgccgctgggcgtgctgtgcgcggtgacgggcccgagc
ggctccggcaagagcacgctggtggatgaggtcatctaccggcacctggctcggcggctg
ggcgtgaaggacgtggaggctccgggcgcggtggacgcgctggagggcgcggaggaggtg
aagtccatcaccttcgtggaccagtctccgctggggcgcacgtcgcgcggcaacgcggcc
acgtacaccaaggcgtgggacaagctgcgagagctcttcgcctccgagccggacgcggag
gtgcgcggcctgacgccggcccacttctccttcaacgtggacaagggccgctgcgaggcg
tgctcgggtgaaggctacgagacggtggagatgcagttcctcgcggacgtggccctcctg
tgcgcggtgtgccggggccggcgcttcaaggaggaggtgctcgccgtccgtcaccagggc
ttcagcgtggcgcaggtgctggagatgacggtggcggaggtgctccagcacttcgggaag
gacaccgcgctccagcgcacgctcgggccggtggctcgcctgggcctggggtatctgccc
ctggggcagccgctgtccacgctgtcgggaggggaggcgcagcggctgaagctcgcgcgt
gccttggccagtgagtcgaaggacgcgctgttcatcatcgacgagccgagcgcgggcctt
catgcggaggacgtgcgccacgtcatcgacgcgctgcacgcgctggtggaccggggggcc
agtgtcctcgtcgtcgaccacgacgtgtcggtgatgaaggcgtcggactggatggtcgac
ctggggcccgtgggtgggcgcgacggtggacggctggtggcggaggggactcccgcggac
gtggcgcgagggaagggcgcgacggcggaggcgctccggggcgagcgtcgggcgcaagcg
cgaccgtcgaaggcacgcaaggtcgcgaaggacgcggcgccggccatcgaggtggagcac
gcgcgcgagcacaacctccaggatgtgtcctgcaagattccgctcggcaagctgaccgtc
gtcacggggccgagtggctcgggcaagagctcgctggcgttcgacgtggtgttcgcggag
gggcagcggcgcttcctggagacgctgagcccgtacgcgcgccagttcctgccgacgatg
cctcggccggacgtggagcgcgtcagctccattcctccgtccgtggcgctggagcagcgc
acctcgcgcgcgggtggcaccagcacggtggccaccgtcaccgaggtggcccactacctg
cgcctcctgttcgcgaagctgggtgagccgcactgccccaaggacgacacgcccatcacc
tccatgtcgccggagctcctcttcgcgcagctccaggcgatgaagggcgaggggacggtg
ctggctcccgcggtgagggcgcgcaagggtacctacctggatgtcttcacggccgcggcg
cgcgcgggcatcacccaggcgattgtcgacggggcgcttgcctccaccgatgacccaccg
cgcctggcgaagacgcgggagcacgacatcgacctggtcatgttcgagggcaagctctcc
aagctgccgcgagacctgttcgacaaggcgctgggctggggacagggcgcgctgaagatt
cgcgcggggaagggcgagacgctgctgtccaccgagcgcacgtgtcctcggtgcggcacc
gccgtgccggagctggacccgcgctggttctcgttcaacacgaagcagggccgctgcgac
tcgtgcgagggcacgggcatccagggtgggcccaccgcgcaggccgagggtgagaccgcg
ccgtgcaaggcgtgtggcgggagccgcctggacccggtgccgcgcggggtgcggttggaa
ggggctcgctatcacgaggtggtgcggcagtccgtcgcctccgcgctcgcgcgggtgaag
ggctggaagttcaagggtgaccgggcgctgctcggcgagccttctcgtcaggagctgctg
cggcgcatggagttcctcgagcgcgtggggctgggctacctctcgctggaccgcaacgcg
gcgtcgctgtcgggcggagagatgcagcggctgcggctgtcggcgcagctgggcgcgggc
ctcacgggggcgatgtacgtgctcgacgagcccaccatcggcctgcatcctcgcgacacc
caccggctcctcgacaaccttcgcgcgctggtgaacacgggctccacggtgctggtggtg
gagcacgactcggacaccatccgcgcggcggaccacctgctggacctgggccccacgggc
gggcgcggcggcggtcgcatcctggcggaggggcctccggacgtggtgctccagggcgac
tcgcccacggcgtatgcgctgcgcgagtcccaggtgcggcctccctccgggcgcggtgcg
ccccagaagtggatcgagctgaagggcgctcgcgcgaacaacctcaagcgcgtggacctg
cggctcccggtgggtcggctcaacgtcgtcagcggtgtctccggctccggcaagagcacg
ctggtgcggcacgtgctgtacccggcgctgcgcgaggcgctggagttggtgtcctcgaag
cccgggccgttcgactcgctgcgaggcgtggaggcggtgaagcgggtgatgtccgtggac
cagtcgcccatcggccgcacgccgcgctcggtgcccgcgacgttcctgggcatctgggat
gagctgcggcgcgccttcgccgcgacgcccgaggcgaagattcgcggcttctccgccgcg
cgcttctccttcaacacggccagcggtggacgctgcaccacctgcgagggacagggctcc
atctcccacgagatgtccttcctcccggacgtggtgacgccgtgcgaggcctgcggtggg
gcccgcttcgacgcggccacgctggagatccgctaccacggcttgtccatcggcgacgtg
ctccgcctgtccgcggacgaggccaaggacgtcttcaaggccctgccgaaggtggccgcg
ccgctgcagtgtctgtcggacctgggcgtggggtatctccagctgggccagggctccaac
acgctgtccggtggcgaggcgcagcgcttgaagctggcgtcggagctgacggcctcctcg
cggcacgagcccacgctctacgtgctcgacgaacccaccaccgggttgcatctgggggac
gtggagaagctcatcacgttcatggggcggctggtggaccggggcgacacgctggtggtc
atcgagcaccacccgtcggtcatcggcgcggcggaccacgtggtggagctggggcccgag
ggtggcgaggaggggggcctcatcgtcgcggagggcacgcctcgcgaggtggcgaaggtg
aagtccgccacgggccgggtgctgcgctcgctcttcacgaacgaggagcctgcgtcgtcg
cgacggggctcgggggcttcccggtga
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integrated database retrieval system