Myxococcus stipitatus: MYSTI_05699
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Entry
MYSTI_05699 CDS
T02436
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
msd
Myxococcus stipitatus
Pathway
msd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYSTI_05699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msd03021
]
MYSTI_05699
Transcription machinery [BR:
msd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYSTI_05699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_ner
Sigma70_r1_2
FH2
Motif
Other DBs
NCBI-ProteinID:
AGC46976
UniProt:
L7UDJ5
LinkDB
All DBs
Position
7342380..7344509
Genome browser
AA seq
709 aa
AA seq
DB search
MPTQKPSKASVKPTKKKVDPVIRKKKAPDSPAAKGAGVKAGAEETESVLAKEATEEAVEK
TTKKKKGVAAVSEDVDPEEAAEEAAAAVEVDPDAVEDDVEEDPVAERKEVKDLLAAGREK
GFLTYDEVNDALPADIVSSDQIDDVMSMFGDNDIEIVDAQKAAQNNEIKPTVTVEEEKED
VDEDEKDEDDEPGGKSNDPVRLYLRKMGSVSLLTREGEVEIAKRIEEGEKEVLRALLACK
VAVEEILDIGNKLKTAKLRVRDVIKDAPEEAQAEGAEEAPEEVGEGEAPAQLAQSELNKI
EQICKQIERFRKFAKDCDVLEEELSGKKKLTEVRKKELKQEMKDLRTKMMEVLEEMRLNK
KQVDRIVLNLKSLIERVEKAEDELRDLERRYGISMKELRPQLKESRENPNIGKKLQKQLN
LTPEQLEVLDRDVRTAVRKIKKVEEEANLPVDALRRNYDAIRLGEKRAERAKSELVEANL
RLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIA
DQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMELPLDKVRKVLKIAKEP
ISLETPIGEEEDSHLGDFIEDKSLVSPADAVINMNLAEQTRKVLATLTPREEKVLRMRFG
IGEKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKRLRSFVES
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcagaagccctcgaaggcgtccgtgaagcccaccaagaagaaggtggatccg
gtgatccgcaagaagaaggctccggacagtcccgcggcgaagggcgctggggtgaaggcg
ggcgcggaggagacggagtccgtcctggcgaaggaggccacggaggaggccgtcgagaag
acgaccaagaagaagaagggcgtcgccgcggtgtcggaggacgtggacccggaggaggcc
gcggaagaggccgccgccgccgtcgaggtggaccccgatgccgtcgaggacgacgtcgag
gaggacccggtcgccgagcgcaaggaggtcaaggacctgctcgccgcgggccgtgagaag
ggcttcctcacctatgacgaggtgaatgacgcgctgcccgcggacatcgtgtcgtcggat
caaatcgacgacgtgatgagcatgttcggcgacaacgacatcgagattgtcgacgcgcag
aaggccgctcagaacaacgaaatcaagcccaccgtcaccgtcgaggaggagaaggaagac
gtcgacgaggacgagaaggacgaggacgacgagccgggcggcaagtccaatgacccggtg
cgtctgtacctgcgcaagatgggcagcgtcagcctgctgacgcgcgagggcgaagtcgag
atcgccaagcgcatcgaggagggcgagaaggaagtcctgcgtgcgctgctcgcgtgcaag
gtcgccgtcgaggagatcctcgacatcggcaacaagctgaagacggccaagctgcgcgtg
cgcgacgtcatcaaggacgcgcccgaggaggcccaggcggagggcgccgaagaggctccc
gaggaagtcggcgagggtgaggccccggcgcagctggcgcagagcgagctcaacaagatc
gagcagatctgcaagcagatcgagcgcttccgcaagttcgccaaggactgtgacgtcctg
gaagaagagctctcgggcaagaagaagctgaccgaggtgcgcaagaaggagctcaagcag
gagatgaaggacctccggaccaagatgatggaggtcctggaggagatgcggctgaacaag
aagcaggtggaccgcatcgtcctgaacctgaagtcgctcatcgagcgcgtcgagaaggcc
gaggacgagctccgtgacttggagcgtcgctacggcatctccatgaaggagcttcgcccg
cagctgaaggagtcgcgggagaaccccaacatcggcaagaagctgcagaagcagctcaac
ctcacgcccgagcagctcgaggtcctggaccgcgacgtgcgcacggcggtgcggaagatc
aagaaggtggaggaggaggccaacctccccgtggatgcgctgcgccgcaactacgacgcc
atccgcctgggtgagaagcgggccgagcgcgccaagagcgagctcgtggaggccaacctg
cgcctcgtggtctccatcgcgaagaagtacacgaaccgcggcctccagttcctggacctc
atccaggagggcaacatcggcctgatgaaggccgtggacaagttcgagtacaagcgcggc
tacaagttctcgacctacgccacctggtggattcgtcaggccatcacccgcgccatcgcg
gaccaggcccgcaccatccgcatcccggtgcacatgatcgagaccatcaacaagctcatc
cgcaccagccgctacctggtgcaggagattggccgcgagccgacgccggaagagatcgcg
gagaagatggagctgccgctcgacaaggtgcgcaaggtcctgaagatcgccaaggagccc
atctccctggagacgcccattggcgaggaggaggacagccacctgggcgacttcatcgag
gacaagagcctggtgtcgccggcggacgcggtcatcaacatgaacctggcggagcagacc
cggaaggtgctcgccacgctgacgccgcgcgaggagaaggtgctccggatgcgctttggc
attggcgagaagagcgaccacacgctggaagaggtcggccaggacttcgaggtgacgcgc
gagcgcatccgtcagatcgaggccaaggcgctgcgcaagctgcgccacccgagccgctcc
aagcggctgcgctccttcgtggagagctga
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