KEGG   Mycobacterium smegmatis MC2 155: MSMEI_2220Help
Entry
MSMEI_2220        CDS       T02191                                 

Definition
(GenBank) putative DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
msg  Mycobacterium smegmatis MC2 155
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:msg00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    MSMEI_2220
   03410 Base excision repair
    MSMEI_2220
   03420 Nucleotide excision repair
    MSMEI_2220
   03430 Mismatch repair
    MSMEI_2220
Enzymes [BR:msg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MSMEI_2220
    6.5.1.6  DNA ligase (ATP or NAD+)
     MSMEI_2220
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MSMEI_2220
DNA replication proteins [BR:msg03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MSMEI_2220
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MSMEI_2220
DNA repair and recombination proteins [BR:msg03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSMEI_2220
   NER (nucleotide excision repair)
    Other NER factors
     MSMEI_2220
   MMR (mismatch exicision repair)
    Other MMR factors
     MSMEI_2220
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2360606..2362138)
Genome map
AA seq 510 aa AA seqDB search
MLLADVAAASTEVAASSARLVKIERIATLLARSAAEDDTQAVAVIVSWLSGELPQRQIGV
GWAALRTLPPPAATPSLTVDDVDDRLSTIKAVAGKGSQATRAGLVHELFSAATDPEQKFL
RHLLSGELRQGALAGVMADAVAKAAGLPAAEIRRAAMLAGNLPAVAAAAVTGGRAALADF
RLRVGRPVGPMLAQTATSVDDALQRLGGTAVLEAKLDGARVQIHRSGCDVSIYTRSLDDV
THRLPEVVEATLALPATELIADAEAIALRPDGRPHLFQVTAARFGRKDPGDLGPLSVFFF
DLLHVDGRDLLDLPTEERFGALDALVRQDQRVDRLVTTDTVAAQEFLERTLAAGHEGVMA
KSPHAAYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRQGKLSNIHLGARDPDSSGFVM
LGKTFKGMTDAMLEWQTQRFLELADGPTDGYVVHLRPEQVVEIAFDGVQRSSRYPAGMAL
RFVRVLRYRDDKSPAEADTVETVRRFYERD
NT seq 1533 nt NT seq  +upstreamnt  +downstreamnt
atgttgctcgccgacgtcgccgccgcatccaccgaagtcgcggcctcctcggcacgcctg
gtcaagatcgaacgcatcgcgacgctgctcgcccgctcggcagccgaggatgacacccaa
gcggtcgcggtgatcgtgtcctggctctccggggaactcccgcagcgtcagatcggtgtc
ggctgggcggcgttgcgcacgttgccgccgccggccgccacaccctccctcaccgtcgac
gacgtcgacgaccggttgagcaccatcaaggccgtcgccggaaaaggttcgcaggccacc
cgcgccggtctggttcacgagctgttcagtgcggcaaccgatccagagcagaaattcctg
cgtcacctgctcagcggtgaactgcgccaaggcgcactcgccggggtgatggccgacgcc
gtcgccaaggccgcaggccttcccgcagccgagatacgccgtgccgcaatgctcgcgggc
aacctgcccgcggtcgcagccgccgccgtcaccggcgggcgtgccgcgctggccgacttc
cggctccgggtgggccggcccgtggggccgatgctcgcgcaaacggccaccagcgtggac
gacgcactccaacgcctcggcggcacagcggttctggaagccaaactggacggcgcccgc
gtgcagatccaccgtagcggctgtgacgtctcgatctacacgcgcagcctcgacgacgtc
acgcaccgccttcccgaggtggtcgaggcgacgctcgcgctccccgccaccgagttgatc
gccgacgccgaggccatcgccctgcgccccgatggcagaccacatctcttccaggtcacc
gccgctcggttcggacgcaaggatccgggcgatctgggtccgctgtcggtgttcttcttc
gacctgctgcatgtcgacggccgcgatctgctcgatctgcccaccgaggaacggttcggc
gcgctcgacgcgctggtgcggcaggatcagcgtgtggaccgtctcgtgacgacggatact
gttgcggcgcaggagttcttggagcgcaccctggcggccggacacgaaggggtcatggcg
aagtcaccgcacgctgcgtacgaggccggccggcgcggcgcgggatggctcaaggtcaag
cccgtccacacgctcgatctcgtcgtgctcgcggtcgagtggggttcgggacgccgccag
ggcaagctgtcgaacatccatctgggggcgcgggatccggattccagcgggttcgtcatg
ttgggcaagacgttcaagggcatgaccgacgcgatgctcgaatggcagacccagcggttc
ctcgaattggccgacgggcccaccgacggatacgtcgtgcacctgcgccccgagcaggtc
gtcgagatcgcgttcgacggtgtgcagcgatcgtcacgctacccggccggcatggcgttg
cggttcgtgcgcgttctgcgctaccgcgacgacaagtccccggccgaggccgacacggtc
gagacggtgcgtcggttctacgagcgcgactga

DBGET integrated database retrieval system