Mycolicibacterium smegmatis INHR2: LI98_33695
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Entry
LI98_33695 CDS
T03432
Name
(GenBank) RNA polymerase sigma24 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msh03021
]
LI98_33695
Transcription machinery [BR:
msh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LI98_33695
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
SnoaL_2
DUF4440
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
AIU25027
UniProt:
A0A8B4QLC5
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Position
complement(6867694..6868584)
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AA seq
296 aa
AA seq
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MTARLDDHTERFTMLRPLLFTIAYEILGSVTEADDVLQDSYLNWAKVDLAAVRDTKSYLA
QLVTRQALKAQRTSARRRESYVGPWLPEPLLLDDRDASADVVLAESVSMAMLVVLETLTP
DERAVFVLHDVFGFDYAEISEAVGKSTAAVRQIAHRAREHVHARRKRFDPVDSDQAAEIT
QQFLTAASTGDMAGLVALLAPDVVTITDGGGLPGAARRPLVGAERVAGAIVRGMRRDLRF
EIVTANGAPAVALRTDEDQLLGLVTLEIHDGRITSLYAIANPDKLAALDGPRVITR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccgattggatgaccacaccgagcggttcacgatgttgcgaccgctgctgttc
accatcgcctacgagatcctcggctcggtcaccgaagccgacgacgtgctgcaggacagc
tatctgaactgggcgaaggtcgatctggctgcggtccgcgacaccaagtcctatctcgcg
caactggtgacgcggcaggccctcaaagcgcagcgcaccagcgcacggcggcgcgagagc
tacgtcggcccctggttgcccgaaccgctgctgctcgacgaccgggacgcctccgcggat
gtggtgctcgccgaatcggtgtcgatggccatgctcgtggtgctcgaaacgctcacaccc
gacgagcgggccgtgttcgtgttgcacgacgtcttcggattcgactacgccgagatctcc
gaggcggtcggcaagtcgacggccgcggtgcgccagatcgcgcaccgcgcgcgcgaacac
gtgcacgcgcggcgcaagcggttcgaccccgtcgattccgaccaggccgcagagatcacg
cagcagttcctcaccgcggcctcgaccggcgacatggccggcctcgtcgcgctgctagcg
cccgacgtcgtcacgatcaccgacggcggcggactcccgggtgccgcccgccgtccgctg
gtgggcgccgagagggtcgcaggcgcgatcgtcagaggcatgcgccgcgacctgcggttc
gagatcgtcaccgccaacggcgcgccggccgtggctctgcggaccgacgaggatcagctg
ctggggctggtcacgctggagatccacgacggcaggatcaccagcctgtacgccattgcc
aatcccgacaagctcgccgccctcgacggtccgcgggtcatcacgcgttga
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