Methanosarcina siciliae C2J: MSSAC_4249
Help
Entry
MSSAC_4249 CDS
T03863
Name
(GenBank) Archaeal DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSSAC_4249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msj03032
]
MSSAC_4249
Enzymes [BR:
msj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSSAC_4249
DNA replication proteins [BR:
msj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSSAC_4249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2
Gta3
DUF2681
HypA
TerY_C
Motif
Other DBs
NCBI-ProteinID:
AKB38839
UniProt:
A0A0E3PRS7
LinkDB
All DBs
Position
5242648..5246088
Genome browser
AA seq
1146 aa
AA seq
DB search
MGETIASKEMHEYFDGLEARLKEAIEIANRARAQGGDPKPTVEIPLAKDLADRVENLIGV
QGVAAKIRELETRMSREEAALEIGKQVAEGVVGNFPTKKDAVEAAIRVSMATLTEGVVAA
PIEGIDKVDLGKNDDGSQYIRIFYSGPIRSAGGTAQALSVLVGDYVRRGIGIDRYKPREE
EVERYVEEILLYKRVASLQYTPSEDEIRLIVRNCPVCIDGDPTEEAEVEGHRDLERIGTN
RVRGGMCLVLAEGLALKAPKVKKHVNKLKMDGWDWLETLIGGAKSGGSAEDDQKSKIKPK
DKYIRDLIAGRPVFSHPSRPGGFRLRYGRSRNTSFASAGINPASMVLLDDFITNGTQLKV
ERPGKAAAMSAVDSIEGPTVRLFSGDLVRIDNIKEAYEVRPQVEAIIDIGEILINYGDFL
ENNHPLMPSPYVFEWWQYDYQAACPEKIPEEKLKNPSSALALRLAEEYNVPLHPKFTYLW
HDINRNEFEALRKFVVENGTFLIGEGILKLPLAASFEDGIKPVLEKLLVLHRVKEGETLI
EEALPFVLCLGLDNSLEEKASMPETDDMVEAAGVLSGFKVYPRAPSRIGARMGRPEKSDL
RKMSPAAQVLFPISNCGGITRNLVSASDYTSCMNGKIGEIEVELGLRECPACGKETYFWR
CECGEFTNPKLSCPRCKIDVRGAETCPKCGRKPTSVANVKLDFRSIYKKAFENVGEREKM
DLIKGVKRLMNGQMTPEPLEKGILRAKHNVYIFKDGTVRYDMSDIPLTHIRADELGITAA
KLRELGYREDIYGKTLERDDQVVCLKVQDLVISYDGAKYILRTAQYVDDLLVKYYKVEPY
YNAETIQDLVGVLLIGLAPHTSAGVLGRLIGFTKASVGYAHPFFHASKRRNCDGDEDCIM
LLMDGILNFSRAYLPDKRGGKMDAPLVLTTRIDPKEVDKEAHNIDVSARYPLEFYRATQE
IKNPTELEGIMDLISSRLGTPEQYEHFMFTHNTSDIAAGPLKSSYKTLGSMIEKMEAQLS
LANKIRAVDAPDVAERVLKSHFLPDLIGNLRSFSRQRMRCIKCGEKFRRPPLTGACPKCG
GNVVLTVHEGAVRKYLEISKEIGERYGVSSYTRQRIELLDYDIRSLFENHKVKQMGLSDF
MSGSAR
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacgattgcaagtaaagaaatgcatgaatacttcgatgggcttgaggcaagg
ttaaaagaggcaattgagattgcaaacagggcccgggctcagggtggagatccaaagccc
actgtggaaattccccttgccaaagaccttgcagatagggtcgaaaaccttatcggtgtc
cagggggttgctgcaaagatccgggaacttgagacccgaatgtccagggaagaagctgct
cttgaaatcgggaaacaggtcgctgaaggagtagtcggaaacttcccgacaaaaaaagat
gctgtagaagccgctatccgtgtttccatggcaaccctgaccgaaggggtggtggcagct
cctatcgaaggaattgacaaggtagacctcggaaaaaacgacgacggctctcagtatatc
cgtatcttttattccgggcccataaggagcgcaggagggactgcgcaggccctttccgtg
cttgtcggggactatgtgcggcgtgggatcgggattgaccgttacaagccaagagaagag
gaagtagagcgttatgtggaagaaatcctgctttacaagagggttgcaagcctgcagtac
acgccttccgaagatgaaatccggcttatagtccggaactgccctgtatgtattgatggg
gacccgactgaagaagctgaggtcgaagggcacagggacctcgagaggatagggacgaac
cgggtccggggagggatgtgcctggtacttgccgaagggctagctctcaaggcccccaag
gtcaaaaagcacgtcaataagttaaagatggacggctgggactggctggaaacccttatc
ggaggggctaaaagcggagggagtgctgaagatgatcagaaaagtaagatcaagccaaag
gacaaatatattcgggacctgatcgccggaaggcctgtgttttctcatccttccaggccg
ggaggtttcaggctgcggtacgggcggtcaagaaatacttcctttgcttcggcagggatt
aatcctgccagcatggtcttgcttgacgattttataactaacgggacccagctcaaggtc
gaaaggcctggaaaagccgcagccatgtcggccgttgactccatagagggacctactgta
aggcttttttcgggagaccttgttcgtatagataatataaaggaggcatatgaagttcgc
ccgcaggtagaagcaattatcgatatcggagaaatcctgataaattacggggacttcctg
gaaaataaccaccctctcatgccttcaccttatgttttcgagtggtggcagtacgactac
caggcagcctgccccgagaaaattccagaagaaaagttgaaaaacccctcatctgccctt
gccctcaggcttgcagaggagtataatgtgccactgcacccgaagtttacctatctctgg
cacgacataaaccggaatgagtttgaagctctccgaaagttcgtagttgaaaatgggact
ttcctgatcggggaaggaattcttaaactgccccttgcagcttcttttgaagatggaata
aagcctgtgcttgaaaagctccttgtactgcacagggtaaaagagggagaaacccttatc
gaagaggctcttccgtttgttttgtgtctcgggcttgataattcccttgaagaaaaagcc
agcatgccagaaacagatgatatggtggaagcagcaggtgttttgagcgggtttaaggtc
tatccccgggctccttcaaggataggggcacgcatgggaaggccggaaaagtccgacctg
cgcaagatgtcccctgcagctcaggttctcttcccgataagcaattgcggaggaattact
cgaaaccttgtttccgcttctgattacacttcctgcatgaacgggaagataggggagatt
gaagtggaattggggctgagagagtgccccgcctgcgggaaggaaacttatttctggcgc
tgcgaatgcggggaatttacaaatcccaaactttcctgcccccgctgcaagatagatgtt
agaggggccgagacctgtcccaaatgcgggagaaagccgacttccgttgcaaacgtaaaa
cttgatttccgttccatttataagaaggcttttgagaacgtaggcgaaagggaaaaaatg
gatttaatcaagggagtaaagcggcttatgaacggacagatgactcccgaacctctggaa
aaaggaatcctgcgcgcaaaacataatgtctatatttttaaggacggaactgtacgctac
gatatgtctgatattccccttacccatatcagggctgatgaacttggaattacggcagcc
aaactccgggaactcggttacagggaagatatttatggaaaaacccttgagagggacgac
caggtcgtctgcctgaaggtgcaggaccttgtgatctcttatgacggggccaagtatatt
ctgcgtactgcacaatacgtggatgacctccttgtgaagtattataaggtagagccctat
tacaatgccgaaactatccaagaccttgtgggggtactgctcatagggcttgctccccat
acttctgcaggagtgctcgggcgccttatagggtttaccaaagcttccgtcggttatgct
catcctttttttcatgcttcaaaacgcaggaattgtgatggggatgaagactgcataatg
cttcttatggatggaattctcaatttttcgagagcatatcttcccgacaaaagagggggg
aagatggatgctcccctggtgttgactaccaggatcgaccccaaggaagtggataaggaa
gcccataacatcgatgtgtctgcacgttatcctcttgagttttacagagctacgcaggaa
atcaaaaatcccaccgaacttgaaggtattatggaccttatcagcagccggcttgggact
cccgagcagtacgaacatttcatgtttacccacaacacttcagatattgccgcaggaccc
ctgaaatcttcatataagactctgggaagcatgattgaaaagatggaggctcaactctcc
cttgctaataagataagggcagtggacgctcctgatgtagctgaaagggttttaaaatcc
catttccttccggatctgataggaaatctccgttccttttccagacagcggatgcgctgc
atcaagtgcggagagaagttcaggcgtccccctcttaccggagcctgcccgaaatgcgga
ggtaatgtagtactgaccgtgcatgaaggggctgttcgcaaataccttgagatttcaaaa
gagatcggggaaaggtacggggtctccagctatacgaggcagaggatcgagttgttggat
tatgatatccgctctttgtttgaaaaccacaaggtcaagcagatgggactttcagatttt
atgtccgggtctgcgcgctga
DBGET
integrated database retrieval system
