Mycolicibacterium smegmatis MC2 155: MSMEG_2778
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Entry
MSMEG_2778 CDS
T00434
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msm03016
]
MSMEG_2778
Enzymes [BR:
msm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSMEG_2778
Transfer RNA biogenesis [BR:
msm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSMEG_2778
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABK70095
UniProt:
A0QW21
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Position
complement(2844852..2846099)
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AA seq
415 aa
AA seq
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MTQGDTEPADVEEAEATPLLTPAEGVPELCVSADEIAGAARQLAGGSGPFAIDAERASGF
RYSNRAYLVQIRRAGAGTALIDPVNHGGSPIDTLEPVAQTLADDEWVLHAADQDLPCLAE
IGLRPGKLYDTELAGRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAA
LDVEVLLELRHAIAAVLEEQGKTEWAAQEFEHLRTYVAQPTRRDRWRRTSGIHKVRNPRA
LAAVRELWTTRDNIARSRDIAPGRILPDAAIINAATVDPKTTAELTALPVFGGAKQRRSA
QVWLDALNRARQNPDPPSASEASNGPPPAARWARRKPEAAARLEAARAGLAELSERVSVP
AENLITPEVVRRLCWDWQPVADVASTVEEFLVDNQVRPWQRELTVPVLTVALAEN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaggggataccgaacctgccgatgtggaggaggcagaagcgacaccgcttctg
acccccgccgaaggcgtccccgaactctgcgtcagcgccgacgagatcgccggggccgca
cgtcagctggcgggtggtagcggtccgttcgcgatcgacgccgaacgcgcgtcgggtttc
cggtactccaaccgggcgtacctggtgcagatccgccgtgccggggcaggcaccgcgctg
atcgacccggtcaaccacggcggctcgccgatcgacacgctcgagcccgtcgcgcagacc
ctggccgacgacgaatgggtgctgcatgccgcggatcaggatctgccgtgtctggccgag
atcggtctgcgtccgggcaagctgtacgacaccgaactggcgggccggctggccgggttc
gaacgcgtcaacctcgcggcgatggtccagcgactgctcggactgcagctcatgaagggc
cacggcgcggccgactggtccaagcgtccgctgcccgacgagtggctcaactatgcggcg
ctggatgtcgaggtgctgctggagttgcgccacgcgatcgccgcggtgctcgaagagcag
ggcaagaccgaatgggccgcacaggaattcgagcacctgcgcacctacgtcgcgcaaccg
acgcgccgggaccggtggcggcgcacgtcgggcatccacaaggtgcgcaacccgcgggcg
ctggccgcggtccgcgagctgtggaccacgcgggacaacatcgcccgcagccgtgacatc
gcccccggccggatcctgcccgacgccgcgatcatcaacgcggccaccgtcgaccccaag
accaccgcggaactcaccgcgctcccggtgttcggcggcgccaagcagcggcgcagcgcc
caggtctggctggacgccctcaaccgcgcgcgacagaaccccgatccgccgtcggcgtca
gaggcgtccaacggcccgccgcccgcggcgcgctgggcacggcgcaaacccgaggccgcc
gcacgcctggaggcggcccgtgccggcctggccgaactgtccgaacgcgtttcggtgccg
gccgagaacctgatcacccccgaggtggtgcgccggctgtgctgggactggcaacccgtg
gccgacgtcgcgtcgaccgtcgaggaattcctggtcgacaaccaggtgcggccgtggcag
cgcgagctcaccgtgccggtgctcaccgtcgcgctggccgagaactga
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