Methanosarcina siciliae HI350: MSSIH_3371
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Entry
MSSIH_3371 CDS
T03864
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
msz
Methanosarcina siciliae HI350
Pathway
msz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIH_3371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msz02000
]
MSSIH_3371
Transporters [BR:
msz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSSIH_3371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Nbs1_C
Motif
Other DBs
NCBI-ProteinID:
AKB34061
UniProt:
A0A0E3LBN1
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Position
complement(4240348..4241976)
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AA seq
542 aa
AA seq
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MTSKNKNENNHIFIILIFIIIASVFFSGCADSDSNTGEASLLNDSEDAGENISSEKDGNL
RAVMIFGPDESLDPGYKWVGWYVREAGIYETLFAYDADMNLVPELAESYESLNDTAWQIN
LRLGVKFHDGTPFNAEAVIFSINRVLDPDNTRHTEYDFIESVSAKNDTTVIIRTKEPYAP
TIASLSDPLLSIVSPEAEDLTHKPVGTGPFKFKNYKEGLRLSVLRNEDYWGGDVKLESAT
IDYVSDPLTRSLKLQADDCDLVRGIPATESEIINENPDLEVLSKETLRLCFMYVNANKEP
LDDLRVRQALNYAINRDQVVSAALEGEGVPATGVFPSTLPWSSNEKLEGYDYSSEKAKEL
LSETGITDTDGDGWLEYEGEPFELTIRTYEKRAELKPTAEVIASQFEKIGIKTEVIVLET
GALSADTSDGNYDLSLYAWGVAPAGDPDYFLSYHFESSGEQAGWTGYSNSEVDEWIKEAR
ESTSQEERQEYYDLVQAQVLEDSPEIFVFYYTELDGINKRVKGYEIYPNEISFITKDIYI
EE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagtaagaataaaaatgaaaataatcacatttttatcatattgattttcattata
attgcatcggtattcttttccggatgtgcagattccgattccaacactggtgaagcgtct
ttacttaatgattctgaagatgctggagaaaacatatcctccgaaaaggatggaaacctt
cgagccgttatgatattcgggccggatgagtccctcgacccaggttacaaatgggtaggc
tggtacgtccgggaagccgggatatatgagactctttttgcctatgatgccgatatgaac
ctcgtgcctgaacttgcggaaagttatgaaagtctcaatgacactgcctggcaaattaac
ctgaggttaggagtaaagttccatgacgggacaccttttaatgccgaagcagtgatattt
tcgataaaccgggtacttgaccctgataacaccaggcatacagagtatgattttatcgaa
tcggtatcagctaaaaatgatacgactgtcatcatcaggacaaaagaaccatatgcaccg
accattgcaagcctttccgaccccctgctttcaatagtaagcccggaagcagaagatctt
acccataaacccgtagggactggaccttttaaattcaaaaattacaaagaaggcctcaga
ctatctgttttacgaaacgaggactactggggaggagatgttaagcttgaaagtgcgact
atcgactacgtttccgatcctcttacaaggtcattaaaactccaggcagatgactgcgac
ctcgtccggggcatcccggccacagaatcagaaatcatcaacgagaaccctgaccttgaa
gtcctcagtaaggaaaccctgcgactctgctttatgtatgtgaacgcgaacaaagagccc
cttgacgacctgagggtaagacaggctctgaattatgcgataaaccgcgaccaggtcgta
agcgcggctctcgaaggggaaggagtgcctgcaacaggagtattcccgtcaactctgccc
tggtcatccaatgaaaagctcgaaggctacgattattcctccgaaaaagcaaaagaactg
ctttcggaaacaggaatcaccgatactgacggagatggctggcttgaatacgaaggggag
cctttcgaacttaccattcgcacctatgaaaaaagagccgaactcaaacccacagccgaa
gttatagcttcccagtttgagaaaatagggatcaaaaccgaggtaattgtccttgaaaca
ggtgctttgagtgcggatacaagcgacgggaactatgatctttccctttatgcctgggga
gttgcccctgccggagatcctgactatttcctctcctaccatttcgagtcttccggagaa
caggccggatggacagggtactctaacagcgaggttgatgaatggatcaaagaagccagg
gaaagcacaagccaggaggagagacaggaatactatgacctggtccaggcccaggtgctt
gaagactctccggaaatattcgtattctattatacggaacttgacggaataaacaaacgg
gtaaaaggatatgagatttacccgaatgagatttccttcattacgaaggacatctacatc
gaagaatga
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